LOCUS AEE82624.1 504 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA ligase protein.
ACCESSION CP002687-1121
PROTEIN_ID AEE82624.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G08310"
/gene_synonym="T12G13.150"
/gene_synonym="T12G13_150"
/inference="Similar to RNA sequence,
EST:INSD:BP833468.1,INSD:DR240333.1,INSD:DR379469.1,
INSD:CK118467.1,INSD:DR271761.1,INSD:ES011223.1,
INSD:EH808121.1,INSD:AV781979.1,INSD:EL213434.1,
INSD:ES115641.1,INSD:BP789531.1,INSD:DR240332.1,
INSD:EL975770.1,INSD:DR373650.1,INSD:BP866316.1,
INSD:ES094810.1,INSD:BP664337.1,INSD:EG514073.1,
INSD:EG528343.1,INSD:EH801843.1,INSD:BP811339.1,
INSD:DR362930.1,INSD:BP799852.1,INSD:DR240331.1,
INSD:BP601371.1,INSD:CD530476.1,INSD:EH968465.1,
INSD:EL067649.1,INSD:EG513818.1,INSD:EL036096.1,
INSD:ES167026.1,INSD:ES175989.1,INSD:EG527232.1,
INSD:EH807946.1,INSD:ES005207.1,INSD:ES167583.1,
INSD:ES082128.1,INSD:DR240334.1,INSD:ES173268.1,
INSD:CD530539.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY142689.1,INSD:AY091128.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G44780.2); Has 53711
Blast hits to 33687 proteins in 1618 species: Archae -
142; Bacteria - 4400; Metazoa - 24303; Fungi - 6688;
Plants - 2484; Viruses - 449; Other Eukaryotes - 15245
(source: NCBI BLink)."
/db_xref="TAIR:AT4G08310"
/db_xref="Araport:AT4G08310"
intron_pos 54:2 (1/8)
intron_pos 90:0 (2/8)
intron_pos 192:2 (3/8)
intron_pos 228:0 (4/8)
intron_pos 335:0 (5/8)
intron_pos 360:2 (6/8)
intron_pos 402:1 (7/8)
intron_pos 496:1 (8/8)
BEGIN
1 MSDGDSTTTS AMEISGDKID LKDGEATTPP KTDIESQILA AMQSRVTYLR DKADNFTFEG
61 VRRLLEEDLK LEKHALDVHK SFVKQHLVQC LAGAENDETS ENSLETEKKD DVTPVKEAAE
121 LSKEHTTKKD GKEDMTGDDE KTKDSPVMGL LTEENTSKSV AEQTKDEDKE VLQSDIKKAL
181 RKRSSYIKAN SEKITMGLLR RLLEQDLKLE KYSLDPYKKF INGELDEILQ AHEATQSSTK
241 AQRKPVSKKV KSTPAKNSDS EEMFDSDGED EEEDKEVAVK KKMAEKRKLS KSEGTGKRKR
301 EKEKPASAKK TKQTDSQSDS DAGEKAPSSE KSVKKPETPT TGYGKRVEHL KSIIKSCGMS
361 ISPSVYRKAK QAPEEKREEI LIKELKELLA KEGLSANPSE KEIKEVKKRK ERTKELEGID
421 TSNIVSSSRR RSSASFVPPP KPIKAEESES DDSEDSENEE DEDEEVVVEE EEEEEDEGGS
481 EDGGEGSQNE GELKTEDGGE EESE
//