LOCUS AEE82568.1 702 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin family protein / WD-40
repeat family protein protein.
ACCESSION CP002687-1056
PROTEIN_ID AEE82568.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PCN"
/locus_tag="AT4G07410"
/gene_synonym="F28D6.14"
/gene_synonym="F28D6_14"
/gene_synonym="POPCORN"
/inference="Similar to RNA sequence,
EST:INSD:BP670651.1,INSD:ES147063.1,INSD:AV523683.1,
INSD:AV813165.1,INSD:CA963919.1,INSD:EL251645.1,
INSD:BP793826.1,INSD:AV528818.1,INSD:BP662788.1,
INSD:ES100571.1,INSD:N96874.1,INSD:AV803585.1,
INSD:AV530043.1,INSD:BP793728.1,INSD:BP602598.1,
INSD:BP780838.1,INSD:ES068212.1,INSD:ES118917.1,
INSD:BP791938.1,INSD:BP607411.1,INSD:BE522269.1,
INSD:EH873416.1"
/note="Transducin family protein / WD-40 repeat family
protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40
repeat-like-containing domain (InterPro:IPR011046), WD40
repeat 2 (InterPro:IPR019782), WD40-repeat-containing
domain (InterPro:IPR017986), WD40 repeat
(InterPro:IPR001680), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: transducin family protein / WD-40 repeat family
protein (TAIR:AT1G27470.1); Has 10654 Blast hits to 6476
proteins in 452 species: Archae - 14; Bacteria - 3757;
Metazoa - 2166; Fungi - 2748; Plants - 788; Viruses - 0;
Other Eukaryotes - 1181 (source: NCBI BLink)."
/db_xref="TAIR:AT4G07410"
/db_xref="Araport:AT4G07410"
intron_pos 86:1 (1/8)
intron_pos 107:2 (2/8)
intron_pos 145:2 (3/8)
intron_pos 200:0 (4/8)
intron_pos 249:1 (5/8)
intron_pos 444:0 (6/8)
intron_pos 505:2 (7/8)
intron_pos 592:2 (8/8)
BEGIN
1 MALAPISGFS SDVEGIKNGY LSEKSNDEEE IGSEEDGSDS DEFHEKSEEE IDRILAAACD
61 DGCVRLYRIS NLEKLTYYRS LPRVSGRALS VTWSPDAKRI FSGSSDGLIR CWDATSCHEV
121 YRITAGLGGL GSSSEICVWS LLSLRCSVLV SGDSTGTVQF WDSEHGTLLE AHSNHKGDVN
181 TLAAAPSHNR VFSAGADGQV ILYKLSGSTN GSQDLKPSSS QKWDYIGYVK AHTHDIRALT
241 VAVPISREDP FPDDILPDKA SRKHRKKGKP VDFTYHKWAH LGVPMLISAG DDAKLFAYSI
301 QEFTKFSPHD ICPAPQRIPM QMVHNSMFNK TSLLLVQGIS TLDILRLNIS SDSSGRASTK
361 SLVRVKSRDA RKIICSAISN TGSHFAYSDQ IGPSLFELKK NEFTKCPWSV SRRRLPELPF
421 AHSMIFSSDC SRLIIAGHDR RIYTIDISSL ELVYAFTPSR EEHEGEAPTP KEPPITKLFT
481 SSDGQWLAAI NCFGDIYVFN LETQRQHWFI SRLDGASVTA AGFHPWNNNA LVISTSSNQV
541 FAFDVEARQL GKWSLLNTYV LPKRYQEFPG EVLGLSFSPS PNSSSVIVYS SRAKCLIDFG
601 KPVEEDEEYD LPNGNLSKTL EGKLVNLGLK KGKGTNRKRR LDEYQLEGKS NERKNFEILP
661 SNHPVLFVGH LSKNSILVIE KPWMDVVKSL DNQPVDRHIF GT
//