LOCUS AEE82567.1 815 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin family protein / WD-40
repeat family protein protein.
ACCESSION CP002687-1055
PROTEIN_ID AEE82567.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PCN"
/locus_tag="AT4G07410"
/gene_synonym="F28D6.14"
/gene_synonym="F28D6_14"
/gene_synonym="POPCORN"
/inference="Similar to RNA sequence,
EST:INSD:DR243378.1,INSD:ES147063.1,INSD:AV529041.1,
INSD:AV813165.1,INSD:EL251645.1,INSD:AV529420.1,
INSD:DR243376.1,INSD:BP793826.1,INSD:BE524058.1,
INSD:N96874.1,INSD:ES100571.1,INSD:BP602598.1,
INSD:BP793728.1,INSD:BP860199.1,INSD:ES068212.1,
INSD:ES118917.1,INSD:DR243377.1,INSD:DR243374.1,
INSD:DR243375.1,INSD:BE522269.1,INSD:EH873416.1,
INSD:BP670651.1,INSD:AV529098.1,INSD:AV523683.1,
INSD:BE522268.1,INSD:AV828958.1,INSD:BP662788.1,
INSD:AV803585.1,INSD:BP780838.1,INSD:BP607411.1,
INSD:BP791938.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY080667.1,INSD:AY133764.1"
/note="Transducin family protein / WD-40 repeat family
protein; CONTAINS InterPro DOMAIN/s: WD40
repeat-like-containing domain (InterPro:IPR011046), WD40
repeat 2 (InterPro:IPR019782), WD40-repeat-containing
domain (InterPro:IPR017986), WD40 repeat
(InterPro:IPR001680), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: transducin family protein / WD-40 repeat family
protein (TAIR:AT1G27470.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G07410"
/db_xref="Araport:AT4G07410"
intron_pos 54:0 (1/10)
intron_pos 102:0 (2/10)
intron_pos 199:1 (3/10)
intron_pos 220:2 (4/10)
intron_pos 258:2 (5/10)
intron_pos 313:0 (6/10)
intron_pos 362:1 (7/10)
intron_pos 557:0 (8/10)
intron_pos 618:2 (9/10)
intron_pos 705:2 (10/10)
BEGIN
1 MLEYRCSSVD WKPSPVVALA NSSDDSQVAA AREDGSLEIW LVSPGAVGWH CQLTIHGDPN
61 SRISSLAWCC SPSIGLPSGR LFSSSIDGSI SEWDLFDLKQ KIVLESIGIS IWQMALAPIS
121 GFSSDVEGIK NGYLSEKSND EEEIGSEEDG SDSDEFHEKS EEEIDRILAA ACDDGCVRLY
181 RISNLEKLTY YRSLPRVSGR ALSVTWSPDA KRIFSGSSDG LIRCWDATSC HEVYRITAGL
241 GGLGSSSEIC VWSLLSLRCS VLVSGDSTGT VQFWDSEHGT LLEAHSNHKG DVNTLAAAPS
301 HNRVFSAGAD GQVILYKLSG STNGSQDLKP SSSQKWDYIG YVKAHTHDIR ALTVAVPISR
361 EDPFPDDILP DKASRKHRKK GKPVDFTYHK WAHLGVPMLI SAGDDAKLFA YSIQEFTKFS
421 PHDICPAPQR IPMQMVHNSM FNKTSLLLVQ GISTLDILRL NISSDSSGRA STKSLVRVKS
481 RDARKIICSA ISNTGSHFAY SDQIGPSLFE LKKNEFTKCP WSVSRRRLPE LPFAHSMIFS
541 SDCSRLIIAG HDRRIYTIDI SSLELVYAFT PSREEHEGEA PTPKEPPITK LFTSSDGQWL
601 AAINCFGDIY VFNLETQRQH WFISRLDGAS VTAAGFHPWN NNALVISTSS NQVFAFDVEA
661 RQLGKWSLLN TYVLPKRYQE FPGEVLGLSF SPSPNSSSVI VYSSRAKCLI DFGKPVEEDE
721 EYDLPNGNLS KTLEGKLVNL GLKKGKGTNR KRRLDEYQLE GKSNERKNFE ILPSNHPVLF
781 VGHLSKNSIL VIEKPWMDVV KSLDNQPVDR HIFGT
//