LOCUS AEE82509.1 735 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc knuckle (CCHC-type) family protein
protein.
ACCESSION CP002687-989
PROTEIN_ID AEE82509.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G05360"
/gene_synonym="C6L9.40"
/gene_synonym="C6L9_40"
/inference="Similar to RNA sequence,
EST:INSD:EG498307.1,INSD:EG498318.1"
/note="Zinc knuckle (CCHC-type) family protein; FUNCTIONS
IN: zinc ion binding, nucleic acid binding; LOCATED IN:
nuclear chromosome; CONTAINS InterPro DOMAIN/s: Rad21/Rec8
like protein, C-terminal (InterPro:IPR006909), Zinc
finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis
thaliana protein match is: Rad21/Rec8-like family protein
(TAIR:AT3G59550.1); Has 149 Blast hits to 143 proteins in
40 species: Archae - 0; Bacteria - 8; Metazoa - 14; Fungi
- 18; Plants - 86; Viruses - 0; Other Eukaryotes - 23
(source: NCBI BLink)."
/db_xref="TAIR:AT4G05360"
/db_xref="Araport:AT4G05360"
intron_pos 21:1 (1/9)
intron_pos 71:1 (2/9)
intron_pos 81:2 (3/9)
intron_pos 122:1 (4/9)
intron_pos 203:0 (5/9)
intron_pos 252:0 (6/9)
intron_pos 280:2 (7/9)
intron_pos 317:0 (8/9)
intron_pos 706:0 (9/9)
BEGIN
1 MGKIKDQKGK EHDHSQCRRY VLQSYLLRTE HISPNSTRNI NMITQDDSLC LLSISIYTLN
61 SSHASLWLFT RSEEESADFG ESEDPSKTVR KRKKLSSSKL GFRRLDNQSK KDQLFNEPLF
121 TGFSNVLLSV FKKDCVAKSY FAAPKEPASV PVSSPTREAE TEINSASPVT QSTVPDSTNQ
181 ESTVQRSSGQ QTEHFQGVAL KFVLPGLNIL EYMLSPPPRS SPFRTNGFTI HPETWETGSY
241 RTQPSTSNNT EELHFLEEGV NTPVRSPVTQ DSGGFSGRTR ALAQHLKERY SGYLSLNKIL
301 EGKTRKIAAR MFYETLGEVP EIVQKIIQEV RQSLKSRLME ILRLPFKKRF SWNERNRALH
361 EFKVDGNKEV LYKSSKGKRC FECKGFRHMC SECANLMKEK EKKFIMSDSE IDSDDGEELK
421 NLVAFTTFES SIASASASGP TSASATGSTS ASATGPATGS DNDQSDDDDL SISDEEFAEN
481 YKALYEHCVK VVEENSVLTK EKLKLEAKVV KTLKFAAEKE EEASQLEETQ KNLRMLNNGT
541 KKLGHILSIG KTDKCGLGFK GNPSKSDPVF VYGGKITSAS GTVKETATVA EIASDTRTDS
601 RTDTETTSGT RKVQKLQSEP RRVFRPVCHH CGVVGHIRPR CFRLLREKNR LMNAYDVRFH
661 GPKCYHYGVQ GHIKRNCFRF IRECSHEGLR RNKVWVRKDD FHGSGGENDD VFGDVVLELE
721 LMSSQHSQKG GDLKM
//