LOCUS AEE82442.1 1267 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana sensitive to freezing 6 protein.
ACCESSION CP002687-896
PROTEIN_ID AEE82442.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SFR6"
/locus_tag="AT4G04920"
/gene_synonym="AtSFR6"
/gene_synonym="IEN1"
/gene_synonym="INSENSITIVE TO EXOGENOUS NAD+ 1"
/gene_synonym="MED16"
/gene_synonym="MEDIATOR 16"
/gene_synonym="SENSITIVE TO FREEZING 6"
/gene_synonym="T1J1.2"
/gene_synonym="T1J1_2"
/gene_synonym="YELLOW AND SENSITIVE TO IRON-DEFICIENCY 1"
/gene_synonym="YID1"
/note="SENSITIVE TO FREEZING 6 (SFR6); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: cold acclimation,
circadian regulation of gene expression, response to
osmotic stress, regulation of long-day photoperiodism,
flowering; LOCATED IN: nucleus; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 9 growth stages."
/db_xref="TAIR:AT4G04920"
/db_xref="Araport:AT4G04920"
intron_pos 113:2 (1/15)
intron_pos 136:2 (2/15)
intron_pos 166:1 (3/15)
intron_pos 204:0 (4/15)
intron_pos 238:0 (5/15)
intron_pos 268:1 (6/15)
intron_pos 467:1 (7/15)
intron_pos 673:2 (8/15)
intron_pos 700:1 (9/15)
intron_pos 728:0 (10/15)
intron_pos 807:0 (11/15)
intron_pos 864:1 (12/15)
intron_pos 1035:0 (13/15)
intron_pos 1094:0 (14/15)
intron_pos 1220:0 (15/15)
BEGIN
1 MNQQNPEEEV SLVNNSGGGG IIEAPAIVEE KEEEGLQQKQ EETIESTDPI LVVVEEKLLE
61 KSVDGEKEDD NSSSSNMEID PVSPATVFCV KLKQPNSNLL HKMSVPELCR NFSAVAWCGK
121 LNAIACASET CARIPSSKAN TPFWIPIHIL IPERPTECAV FNVVADSPRD SVQFIEWSPT
181 SCPRALLIAN FHGRITIWTQ PTQGSANLVH DATSWQCEHE WRQDIAVVTK WLTGASPYRW
241 LSSKPSSGTN AKSTFEEKFL SQSSESSARW PNFLCVCSVF SSGSVQIHWS QWPSNQGSTA
301 PKWFSTKKGL LGAGPSGIMA ADAIITDSGA MHVAGVPIVN PSTIVVWEVT PGPGNGLQAT
361 PKISTGSRVP PSLSSSSWTG FAPLAAYLFS WQEYLISEIK QGKKPSDQDS SDAISLSCSP
421 VSNFSAYVSP EAAAQSAATT TWGSGVTAVA FDPTRGGSVI AVVIVEGQYM SPYDPDEGPS
481 ITGWRVQRWE SSVQPVVLHQ IFGNPTSNFG GQVPTQTVWV SRVDMSIPPT KDFKNHQVAA
541 AGPSVDAPKE PDSGDEKANK VVFDPFDLPS DIRTLARIVY SAHGGEIAIA FLRGGVHIFS
601 GPTFSPVENY QINVGSAIAA PAFSPTSCCS ASVWHDAAKD CAMLKIIRVL PPALPRNQSK
661 VDQSTWERAI AERFWWSLLV GVDWWDAVGC TQSAAEDGIV SLNSVIAVMD ADFHSLPSTQ
721 HRQQYGPNLD RIKCRLLEGT NAQEVRAMVL DMQARLLLDM LGKGIESALV NPSALVFEPW
781 RVDGETITGI NPEAMAVDPA LVSSIQAYVD AVLDLASHFI TRLRRYASFC RTLASHAASA
841 GTGSNRNNVT SPTQNASSPA TPQGQPTTTT TTTATTNSSG SSHVQAWMQG AIAKISSSND
901 GSNSTASPIS GSPTFMPISI NTGTFPGTPA VRLIGDCHFL HRLCQLLLFC FLQRSSRFPQ
961 RNADVSSQKL QTGATSKLEE VNSAKPTPAL NRIEDAQGFR GAQLGTGVKG IDENSARTTK
1021 MGSGNAGQGY TYEEVRVLFH ILMDLCKRTS GLAHPLPGSQ VGSGNIQVRL HYIDGNYTVL
1081 PEVVEAALGP HMQNMPRPRG ADAAGLLLRE LELHPPSEEW HRRNLFGGPG SEPEDMILTD
1141 DVSKLSNSLD LPDTNFSGIC DGYNRVHSLW PRKRRMSERD AAFGSNTSVG LGAYLGIMGS
1201 RRDVVTATWK TGLEGVWYKC IRCLRQTSAF ASPGATKQPN PNERETWWTS RWVYCCPMCG
1261 GTWVRVV
//