LOCUS AEE82441.1 1278 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana sensitive to freezing 6 protein.
ACCESSION CP002687-894
PROTEIN_ID AEE82441.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SFR6"
/locus_tag="AT4G04920"
/gene_synonym="AtSFR6"
/gene_synonym="IEN1"
/gene_synonym="INSENSITIVE TO EXOGENOUS NAD+ 1"
/gene_synonym="MED16"
/gene_synonym="MEDIATOR 16"
/gene_synonym="SENSITIVE TO FREEZING 6"
/gene_synonym="T1J1.2"
/gene_synonym="T1J1_2"
/gene_synonym="YELLOW AND SENSITIVE TO IRON-DEFICIENCY 1"
/gene_synonym="YID1"
/inference="Similar to RNA sequence,
EST:INSD:EL984081.1,INSD:CO048761.1,INSD:AV522239.1,
INSD:CO048753.1,INSD:CO048760.1,INSD:CO048756.1,
INSD:DR360460.1,INSD:CO048757.1,INSD:CO048755.1,
INSD:CO048752.1,INSD:AV548531.1,INSD:CO048762.1,
INSD:CO048749.1,INSD:EL341395.1,INSD:EL137058.1,
INSD:CO048758.1,INSD:EH949323.1,INSD:CO048804.1,
INSD:AV546208.1,INSD:EH971545.1,INSD:EL977461.1,
INSD:EL286855.1,INSD:CO048750.1,INSD:AV546847.1,
INSD:CO048759.1,INSD:DR360462.1,INSD:CO048751.1,
INSD:DR360461.1,INSD:EL205735.1,INSD:CO048763.1,
INSD:AV548250.1,INSD:CO048754.1,INSD:EL038350.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX828234.1"
/note="SENSITIVE TO FREEZING 6 (SFR6); Has 159 Blast hits
to 81 proteins in 31 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 5; Plants - 45; Viruses - 0; Other
Eukaryotes - 99 (source: NCBI BLink)."
/db_xref="TAIR:AT4G04920"
/db_xref="Araport:AT4G04920"
intron_pos 113:2 (1/15)
intron_pos 136:2 (2/15)
intron_pos 166:1 (3/15)
intron_pos 204:0 (4/15)
intron_pos 238:0 (5/15)
intron_pos 268:1 (6/15)
intron_pos 467:1 (7/15)
intron_pos 673:2 (8/15)
intron_pos 700:1 (9/15)
intron_pos 728:0 (10/15)
intron_pos 807:0 (11/15)
intron_pos 864:1 (12/15)
intron_pos 1046:0 (13/15)
intron_pos 1105:0 (14/15)
intron_pos 1231:0 (15/15)
BEGIN
1 MNQQNPEEEV SLVNNSGGGG IIEAPAIVEE KEEEGLQQKQ EETIESTDPI LVVVEEKLLE
61 KSVDGEKEDD NSSSSNMEID PVSPATVFCV KLKQPNSNLL HKMSVPELCR NFSAVAWCGK
121 LNAIACASET CARIPSSKAN TPFWIPIHIL IPERPTECAV FNVVADSPRD SVQFIEWSPT
181 SCPRALLIAN FHGRITIWTQ PTQGSANLVH DATSWQCEHE WRQDIAVVTK WLTGASPYRW
241 LSSKPSSGTN AKSTFEEKFL SQSSESSARW PNFLCVCSVF SSGSVQIHWS QWPSNQGSTA
301 PKWFSTKKGL LGAGPSGIMA ADAIITDSGA MHVAGVPIVN PSTIVVWEVT PGPGNGLQAT
361 PKISTGSRVP PSLSSSSWTG FAPLAAYLFS WQEYLISEIK QGKKPSDQDS SDAISLSCSP
421 VSNFSAYVSP EAAAQSAATT TWGSGVTAVA FDPTRGGSVI AVVIVEGQYM SPYDPDEGPS
481 ITGWRVQRWE SSVQPVVLHQ IFGNPTSNFG GQVPTQTVWV SRVDMSIPPT KDFKNHQVAA
541 AGPSVDAPKE PDSGDEKANK VVFDPFDLPS DIRTLARIVY SAHGGEIAIA FLRGGVHIFS
601 GPTFSPVENY QINVGSAIAA PAFSPTSCCS ASVWHDAAKD CAMLKIIRVL PPALPRNQSK
661 VDQSTWERAI AERFWWSLLV GVDWWDAVGC TQSAAEDGIV SLNSVIAVMD ADFHSLPSTQ
721 HRQQYGPNLD RIKCRLLEGT NAQEVRAMVL DMQARLLLDM LGKGIESALV NPSALVFEPW
781 RVDGETITGI NPEAMAVDPA LVSSIQAYVD AVLDLASHFI TRLRRYASFC RTLASHAASA
841 GTGSNRNNVT SPTQNASSPA TPQVFPDKSL YLAVGQPTTT TTTTATTNSS GSSHVQAWMQ
901 GAIAKISSSN DGSNSTASPI SGSPTFMPIS INTGTFPGTP AVRLIGDCHF LHRLCQLLLF
961 CFLQRSSRFP QRNADVSSQK LQTGATSKLE EVNSAKPTPA LNRIEDAQGF RGAQLGTGVK
1021 GIDENSARTT KMGSGNAGQG YTYEEVRVLF HILMDLCKRT SGLAHPLPGS QVGSGNIQVR
1081 LHYIDGNYTV LPEVVEAALG PHMQNMPRPR GADAAGLLLR ELELHPPSEE WHRRNLFGGP
1141 GSEPEDMILT DDVSKLSNSL DLPDTNFSGI CDGYNRVHSL WPRKRRMSER DAAFGSNTSV
1201 GLGAYLGIMG SRRDVVTATW KTGLEGVWYK CIRCLRQTSA FASPGATKQP NPNERETWWT
1261 SRWVYCCPMC GGTWVRVV
//