LOCUS AEE82374.1 303 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana plant UBX domain containing protein 4 protein.
ACCESSION CP002687-789
PROTEIN_ID AEE82374.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PUX4"
/locus_tag="AT4G04210"
/gene_synonym="plant UBX domain containing protein 4"
/gene_synonym="T27D20.10"
/gene_synonym="T27D20_10"
/inference="Similar to RNA sequence,
EST:INSD:DR300399.1,INSD:EH832403.1,INSD:DR300368.1,
INSD:DR300427.1,INSD:DR300362.1,INSD:DR300436.1,
INSD:DR300365.1,INSD:DR300370.1,INSD:AV831696.1,
INSD:DR300384.1,INSD:EH961470.1,INSD:DR300405.1,
INSD:EH970554.1,INSD:DR300429.1,INSD:DR300431.1,
INSD:DR300364.1,INSD:DR300440.1,INSD:DR300366.1,
INSD:AV551553.1,INSD:DR300421.1,INSD:DR300363.1,
INSD:DR300418.1,INSD:DR300388.1,INSD:DR300438.1,
INSD:DR300406.1,INSD:AV817453.1,INSD:ES001621.1,
INSD:DR300401.1,INSD:DR370198.1,INSD:BP609297.1,
INSD:EH983134.1,INSD:DR300428.1,INSD:ES172996.1,
INSD:DR300439.1,INSD:BP849593.1,INSD:DR300414.1,
INSD:EH922132.1,INSD:EL054968.1,INSD:DR300425.1,
INSD:DR300437.1,INSD:DR300391.1,INSD:EL081492.1,
INSD:DR300393.1,INSD:DR300410.1,INSD:DR300434.1,
INSD:BP631182.1,INSD:EG517107.1,INSD:DR300447.1,
INSD:DR300403.1,INSD:DR300367.1,INSD:BP788679.1,
INSD:DR300385.1,INSD:DR300443.1,INSD:EL028842.1,
INSD:DR300451.1,INSD:ES028517.1,INSD:DR300452.1,
INSD:DR300374.1,INSD:DR300412.1,INSD:DR300416.1,
INSD:DR300386.1,INSD:DR300444.1,INSD:BP584521.1,
INSD:DR300432.1,INSD:DR300445.1,INSD:DR300423.1,
INSD:DR300394.1,INSD:EG517109.1,INSD:AV539157.1,
INSD:DR300449.1,INSD:DR300435.1,INSD:DR300371.1,
INSD:EH901059.1,INSD:DR300379.1,INSD:DR300422.1,
INSD:EL991408.1,INSD:ES165675.1,INSD:DR300369.1,
INSD:EL220549.1,INSD:DR300409.1,INSD:DR300361.1,
INSD:DR300383.1,INSD:DR300450.1,INSD:EL245808.1,
INSD:ES062782.1,INSD:DR300453.1,INSD:DR300417.1,
INSD:DR300372.1,INSD:DR300381.1,INSD:DR300392.1,
INSD:DR300420.1,INSD:EL179297.1,INSD:EH970281.1,
INSD:DR300397.1,INSD:DR300382.1,INSD:DR300377.1,
INSD:EL250610.1,INSD:DR300396.1,INSD:DR300455.1,
INSD:DR300426.1,INSD:DR300433.1,INSD:EH841855.1,
INSD:DR355422.1,INSD:DR300430.1,INSD:BP801867.1,
INSD:DR300380.1,INSD:DR300402.1,INSD:DR300389.1,
INSD:EH893350.1,INSD:DR300408.1,INSD:DR377099.1,
INSD:EH866704.1,INSD:AI996947.1,INSD:EL101983.1,
INSD:DR300424.1,INSD:DR300378.1,INSD:DR300448.1,
INSD:DR300454.1,INSD:DR300413.1,INSD:DR300404.1,
INSD:EL164063.1,INSD:EH839813.1,INSD:DR300376.1,
INSD:DR300398.1,INSD:EL099887.1,INSD:DR300395.1,
INSD:DR300407.1,INSD:DR300419.1,INSD:BP860796.1,
INSD:ES142262.1,INSD:DR300415.1,INSD:DR300411.1,
INSD:DR300446.1,INSD:DR300400.1,INSD:BU635903.1,
INSD:DR300442.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY122960.1,INSD:AY085333.1,INSD:AY572784.1,
INSD:AY091099.1"
/note="plant UBX domain containing protein 4 (PUX4);
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain
(InterPro:IPR012989); BEST Arabidopsis thaliana protein
match is: plant UBX domain-containing protein 3
(TAIR:AT4G22150.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G04210"
/db_xref="Araport:AT4G04210"
intron_pos 49:2 (1/3)
intron_pos 142:0 (2/3)
intron_pos 174:0 (3/3)
BEGIN
1 MSSKDKKPSK PSSSRGGIRT LSDLNRRSGP DSDSDSDGPQ EYYTGGEKSG MLVQDPSKKD
61 DVDEIFNQAR QLGAVEGPLE PPPSSRSFTG TGRLLSGENV PTGNQQPEPV VHNIVFWSNG
121 FTIDDGPLRK LDDPENASFL ESIRKSECPK ELEPADRRAP VHVNLMRKEE KCPERQKRRV
181 SFQGVGRTLG GSNEGSGSSS PVAPDSAPIP IQTEPAPSQS LVIDETVPTT SIQLRLADGT
241 RLVAKFNHHH TVNDIRGFID SSRPGASLNY QLQTMGFPPK PLTDLTQTIE EAGLANSVVL
301 QKF
//