LOCUS AEE82320.1 1029 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pre-mRNA splicing factor-like protein protein.
ACCESSION CP002687-713
PROTEIN_ID AEE82320.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EMB2770"
/locus_tag="AT4G03430"
/gene_synonym="EMBRYO DEFECTIVE 2770"
/gene_synonym="F9H3.5"
/gene_synonym="F9H3_5"
/gene_synonym="STA1"
/gene_synonym="STABILIZED 1"
/inference="Similar to RNA sequence,
EST:INSD:T88161.1,INSD:EL981033.1,INSD:EL012409.1,
INSD:EL076111.1,INSD:BP794675.1,INSD:AV547848.1,
INSD:EL995961.1,INSD:EL981634.1,INSD:EL261823.1,
INSD:BP826955.1,INSD:AV823351.1,INSD:EL023081.1,
INSD:EH877339.1,INSD:ES116711.1,INSD:BP607370.1,
INSD:ES177225.1,INSD:AV784298.1,INSD:BE528091.1,
INSD:AV530137.1,INSD:EL140014.1,INSD:BP805115.1,
INSD:AV548447.1,INSD:BP599980.1,INSD:EH921098.1,
INSD:EL120540.1,INSD:EL033694.1,INSD:EL162236.1,
INSD:ES011670.1,INSD:EL989516.1,INSD:AA394697.1,
INSD:BP807400.1,INSD:ES167609.1,INSD:ES001247.1,
INSD:EH901211.1,INSD:CD531043.1,INSD:AV548059.1,
INSD:EL251731.1,INSD:BE525470.1,INSD:ES060812.1,
INSD:BE528855.1,INSD:EH918659.1,INSD:AV524265.1,
INSD:AI995700.1,INSD:BP597877.1,INSD:BP811279.1,
INSD:AV529232.1,INSD:ES012465.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX828869.1,INSD:AY142510.1,INSD:AK226702.1,
INSD:AY059720.1,INSD:AK221039.1"
/note="EMBRYO DEFECTIVE 2770 (EMB2770); FUNCTIONS IN:
binding; INVOLVED IN: nuclear mRNA splicing, via
spliceosome, response to cold, response to abiotic
stimulus; LOCATED IN: nucleus; EXPRESSED IN: 27 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: RNA-processing protein, HAT helix
(InterPro:IPR003107), Tetratricopeptide-like helical
(InterPro:IPR011990), PRP1 splicing factor, N-terminal
(InterPro:IPR010491), Ubiquitin supergroup
(InterPro:IPR019955), Tetratricopeptide repeat-containing
(InterPro:IPR013026); BEST Arabidopsis thaliana protein
match is: beta-galactosidase 14 (TAIR:AT4G38590.1); Has
3874 Blast hits to 2098 proteins in 386 species: Archae -
98; Bacteria - 366; Metazoa - 1194; Fungi - 916; Plants -
656; Viruses - 0; Other Eukaryotes - 644 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G03430"
/db_xref="Araport:AT4G03430"
BEGIN
1 MVFLSIPNGK TLSIDVNPNS TTISAFEQLA HQRSDVPQSF LRYSLRMRNP SRVFVDSKDS
61 DSILLSDLGV SRFSTVIIHV LLLGGMQAAP PKPRLDFLNS KPPSNYVAGL GRGATGFTTR
121 SDIGPARAAP DLPDRSALAT AAAPGVGRGA GKPSEAEAED DEEAEEKRYD ENQTFDEFEG
181 NDVGLFANAE YDEDDKEADA IWESIDQRMD SRRKDRREAK LKEEIEKYRA SNPKITEQFA
241 DLKRKLHTLS ADEWDSIPEI GDYSLRNKKK KFESFVPIPD TLLEKAKKEK ELVMALDPKS
301 RAAGGSETPW GQTPVTDLTA VGEGRGTVLS LKLDNLSDSV SGQTVVDPKG YLTDLKSMKR
361 TTDEEIYDRN RARLLYKSLT QSNPKNPNGW IAAARVEEVD GKIKAARFQI QRGCEECPKN
421 EDVWLEACRL ANPEDAKGVI AKGVKLIPNS VKLWLEAAKL EHDVENKSRV LRKGLEHIPD
481 SVRLWKAVVE LANEEDARIL LHRAVECCPL HLELWVALAR LETYAESKKV LNKAREKLPK
541 EPAIWITAAK LEEANGKLDE ANDNTAMVGK IIDRGIKTLQ REGVVIDREN WMSEAEACER
601 VGSVATCQAI IKNTIGIGVE EEDRKRTWVA DADECKKRGS IETARAIYAH ALSVFLTKKS
661 IWLKAAQLEK SHGSRESLDA LLRKAVTYVP QAEVLWLMGA KEKWLAGDVP AARAILQEAY
721 AAIPNSEEIW LAAFKLEFEN KEPERARMLL AKARERGGTE RVWMKSAIVE RELGNVEEER
781 RLLNEGLKQF PTFFKLWLML GQLEERFKHL EQARKAYDTG LKHCPHCIPL WLSLADLEEK
841 VNGLNKARAI LTTARKKNPG GAELWLAAIR AELRHDNKRE AEHLMSKALQ DCPKSGILWA
901 ADIEMAPRPR RKTKSIDAMK KCDRDPHVTI AVAKLFWQDK KVEKARAWFE RAVTVGPDIG
961 DFWALFYKFE LQHGSDEDRK EVVAKCVACE PKHGEKWQAI SKAVENAHQP IEVILKRVVN
1021 ALSKEENSA
//