LOCUS AEE82306.1 284 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana translocon at the inner envelope
membrane of chloroplasts 20-IV protein.
ACCESSION CP002687-693
PROTEIN_ID AEE82306.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="Tic20-IV"
/locus_tag="AT4G03320"
/gene_synonym="AtTic20-IV"
/gene_synonym="F4C21.25"
/gene_synonym="F4C21_25"
/gene_synonym="translocon at the inner envelope membrane
of chloroplasts 20-IV"
/inference="Similar to RNA sequence,
EST:INSD:EL213459.1,INSD:CB257691.1,INSD:ES134482.1,
INSD:EL304617.1,INSD:AV797459.1,INSD:BP825983.1,
INSD:DR269512.1,INSD:AV827180.1,INSD:EL025564.1,
INSD:EL004657.1,INSD:EG480057.1,INSD:DR269513.1,
INSD:EG519385.1,INSD:BP633744.1,INSD:DR379494.1,
INSD:AV537149.1,INSD:BP576479.1,INSD:DR269514.1,
INSD:BP829084.1,INSD:AV801260.1,INSD:BP595578.1,
INSD:DR269511.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX828045.1,INSD:AY084543.1,INSD:AF361633.1,
INSD:AY056069.1,INSD:BX829121.1"
/note="translocon at the inner envelope membrane of
chloroplasts 20-IV (tic20-IV); LOCATED IN: integral to
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised conserved protein ycf60
(InterPro:IPR019109), Chloroplast protein import component
Tic20 (InterPro:IPR005691); BEST Arabidopsis thaliana
protein match is: translocon at the inner envelope
membrane of chloroplasts 20 (TAIR:AT1G04940.1); Has 86
Blast hits to 84 proteins in 20 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 84; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT4G03320"
/db_xref="Araport:AT4G03320"
intron_pos 20:2 (1/2)
intron_pos 65:1 (2/2)
BEGIN
1 MQGLAATTTN RGSLTFLAPR NHSPISKKFV NPRVFFPNVD SSAKLRLSAS SISRRCPREI
61 APLSATASVD FAAAATSSNQ LFANGLPPLA PGLRRHRRPI EPARVAKDDF FKIKLPKIAE
121 RPEWWWRTLA CVPYLISLQI SDVGFYVQPF LEKHDAIGDM IYFIPGAINR WPTWFFMVYC
181 YLGYMWVVKN KELPHYLRFH MMMGMLLETA LQVIWCTSNF FPLIHFKGRF GMYYWMAIGF
241 TYICLLLECI RCALAGVYAQ IPFMTDAASI HTLFNLGGFQ RPLR
//