LOCUS AEE82297.1 507 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002687-681
PROTEIN_ID AEE82297.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G03250"
/gene_synonym="F4C21.18"
/gene_synonym="F4C21_18"
/inference="Similar to RNA sequence,
EST:INSD:ES153081.1,INSD:DR751684.1,INSD:DR751683.1,
INSD:ES035539.1,INSD:EH847715.1,INSD:ES087750.1,
INSD:DR751631.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ441296.1,INSD:BT026372.1"
/note="Homeodomain-like superfamily protein; FUNCTIONS IN:
DNA binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, regulation of transcription; LOCATED IN:
nucleus; CONTAINS InterPro DOMAIN/s: Homeobox
(InterPro:IPR001356), Homeodomain-like
(InterPro:IPR009057), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: homeobox-1 (TAIR:AT1G28420.1); Has 665 Blast
hits to 657 proteins in 124 species: Archae - 0; Bacteria
- 0; Metazoa - 482; Fungi - 17; Plants - 151; Viruses - 3;
Other Eukaryotes - 12 (source: NCBI BLink)."
/db_xref="TAIR:AT4G03250"
/db_xref="Araport:AT4G03250"
intron_pos 4:1 (1/7)
intron_pos 40:1 (2/7)
intron_pos 242:1 (3/7)
intron_pos 269:0 (4/7)
intron_pos 427:0 (5/7)
intron_pos 452:0 (6/7)
intron_pos 484:2 (7/7)
BEGIN
1 MHSDSGEATA DGDKASTENS KKRKLKTPMQ VMALENFYNE HKYPTEEMKG KLAEEVGLTE
61 KQVSGWFCHR RLKDKRHVKE DGNAIGSQDR SSVVLQDRGS GLRQDSCGST KQTDYWNPKP
121 REVESQRLYM GNADGEDSTS SDRSSSLRKN LVSSKDGIRD VESSRYVAHK DVIQHPQFMR
181 SYGYNKPSGY LKVKGESENF AITAVKRQLG RQYQEDGPPL GVEFDPLPPG AFEPQTNPIV
241 HEPIYVGNQR RPHLPHLLGT RKSFNPGPSY ELARKSKLHS PDPDSEDDEH DDDDNIMVGM
301 EPGLRDKKSF GEPRLKSPST SFYNSVPRHK SFKETFKGSP REIPVTNSKK GWISSKSWAE
361 GSRNHLVANV QNLSGSNIET NQSHDYDNNI SNGGRKTGYL TKSSKLLPPS RSRSPESMDR
421 GPSSGMAGIY HGERNQMKMQ REKLHSTDEP PVAKRVKHGY IQQVYAPKSS SYSEILERKS
481 QINRSGVELP SSLSGDDETD ESSSSMD
//