LOCUS AEE82270.2 888 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana sequence-specific DNA binding transcription
factor ATNDX protein.
ACCESSION CP002687-634
PROTEIN_ID AEE82270.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G03090"
/gene_synonym="AtNDX"
/gene_synonym="NDX"
/gene_synonym="Nodulin Homeobox"
/gene_synonym="T4I9.3"
/gene_synonym="T4I9_3"
/note="sequence-specific DNA binding;sequence-specific DNA
binding transcription factors; FUNCTIONS IN:
sequence-specific DNA binding, sequence-specific DNA
binding transcription factor activity; INVOLVED IN:
regulation of transcription, DNA-dependent; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Homeobox
(InterPro:IPR001356)."
/db_xref="TAIR:AT4G03090"
/db_xref="Araport:AT4G03090"
intron_pos 49:0 (1/14)
intron_pos 101:0 (2/14)
intron_pos 129:0 (3/14)
intron_pos 172:0 (4/14)
intron_pos 245:0 (5/14)
intron_pos 289:0 (6/14)
intron_pos 320:0 (7/14)
intron_pos 371:0 (8/14)
intron_pos 467:1 (9/14)
intron_pos 513:1 (10/14)
intron_pos 536:2 (11/14)
intron_pos 559:0 (12/14)
intron_pos 716:0 (13/14)
intron_pos 728:2 (14/14)
BEGIN
1 MVRLLQPKHM VQAVNALHWR NSVEFHKLLK DNGDFSICFN SEQVLPQKIS VEKMVKMLPR
61 HLIAVVMTPN KDGKSRYILC GIRLLQTLCD LTPRNAKLEQ VLLDDVKLSA QMIDLVILVI
121 IALGRNRKES CNSNKESLLE ATLVASCLHL FHGFISPNSQ DLVLVLLAHP RVDVFIDSAF
181 GAVLNVVISL KAKLLYRQTD SPKKLGASSV EEVNFHCQQA EAALQFLHSL CQHKPFRERV
241 AKNKELCGKG GVLRLAQSIL SLTITPEFVG ATVTIASTSR MKAKVLSILQ HLFEAESVSF
301 LDEVANAGNL HLAKTVASEV LKLLRLGLSK ASMATASPDY PMGFVLLNAM RLADVLTDDS
361 NFRSFFTEHF SMVLSAVFCL SHGDFLSMLC SSDLSSREDD ANVDYDLFKS AGWILSVFSS
421 SGQSVTPQFK LSLQNNLTMS SYAHQRTSLF IKMIANLHCF VPNVCQEQDR NRFIQNVMSG
481 LRKDPSSILI KMLPGSSYTP VAQRGTGVCR NLGSLLRHAE SLIPSSLNEE DFLLLRVFCD
541 QLQPLIHSEF EESQVQVKDI EGRGGNLSGK LKELLNLNNE EASEDCDVRV EGVMTKQGVN
601 EEIDTVERLK ESDADASNLE TSGSDTSSNR GKGLVEEGEL VQNMSKRFKG SASGEVKEDE
661 KSETFLVFEK QKKKRKRSIM NADQMGMIEK ALAEEPDLQR NSASRQLWAD KISQKGSEVI
721 TSSQLKNWLN NRKAKLARAN KQTGPAHDNN SSGDLPESPG DENTWQQKPS TPIKDQTVTE
781 TPKTGENLMR TSSSSEEGIK QGQQVRLMDE RGDEIGKGTV LRTDGEWNGL SLETRQICVV
841 DVMELSESYD GSKKMIPYGS DDVGRTFTEA NSRFGVMRVA WDVNKLQY
//