LOCUS AEE82253.1 569 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana oxidoreductase, 2OG-Fe(II) oxygenase
family protein protein.
ACCESSION CP002687-610
PROTEIN_ID AEE82253.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G02940"
/gene_synonym="T4I9.18"
/gene_synonym="T4I9_18"
/inference="Similar to RNA sequence,
EST:INSD:EL329588.1,INSD:EG518096.1,INSD:AI998574.1,
INSD:BP647697.1,INSD:ES068235.1,INSD:AV530965.1,
INSD:AV832265.1,INSD:BP808173.1,INSD:EH922345.1,
INSD:AV524983.1,INSD:BP620907.1,INSD:EH822622.1,
INSD:EH936922.1,INSD:AV561725.1,INSD:BP656636.1,
INSD:CD530122.1,INSD:AV518111.1,INSD:CO048483.1,
INSD:BP657355.1,INSD:DR359314.1,INSD:EG527484.1,
INSD:EL171261.1,INSD:EG527485.1,INSD:BX841327.1,
INSD:BP837852.1,INSD:BP833762.1,INSD:BP576673.1,
INSD:DR359313.1,INSD:AV518251.1,INSD:ES141134.1,
INSD:AV820228.1,INSD:BP593714.1,INSD:BP793843.1,
INSD:CD533163.1,INSD:BP796421.1,INSD:ES010941.1,
INSD:CB257058.1,INSD:EL256622.1,INSD:EH992549.1,
INSD:DR359312.1,INSD:EL206042.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY093043.1,INSD:AY128924.1,INSD:BX829271.1"
/note="oxidoreductase, 2OG-Fe(II) oxygenase family
protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED
IN: response to karrikin; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase
(InterPro:IPR005123); BEST Arabidopsis thaliana protein
match is: oxidoreductase, 2OG-Fe(II) oxygenase family
protein (TAIR:AT2G48080.1); Has 217 Blast hits to 213
proteins in 52 species: Archae - 0; Bacteria - 14; Metazoa
- 24; Fungi - 16; Plants - 131; Viruses - 0; Other
Eukaryotes - 32 (source: NCBI BLink)."
/db_xref="TAIR:AT4G02940"
/db_xref="Araport:AT4G02940"
intron_pos 187:1 (1/6)
intron_pos 236:0 (2/6)
intron_pos 275:1 (3/6)
intron_pos 316:1 (4/6)
intron_pos 355:0 (5/6)
intron_pos 406:2 (6/6)
BEGIN
1 MTIAAAPARQ TDRSATGFNP AYVTTAKAVS VPVQVPPATV VSEGLGKDAL ISWFRGEFAA
61 ANAIIDAMCS HLRIAEEAVS GSEYEAVFAA IHRRRLNWIP VLQMQKYHSI AEVAIELQKV
121 AAKKAEDLKQ KKTEEEAEED LKEVVATEEE EVKKECFNGE KVTENDVNGD VEDVEDDSPT
181 SDITDSGSHQ DVHQTVVADT AHQIICHSHE DCDARSCEIK PIKGFQAKEQ VKGHTVNVVK
241 GLKLYEELLK EDEISKLLDF VAELREAGIN GKLAGESFIL FNKQIKGNKR ELIQLGVPIF
301 GHVKADENSN DTNNSVNIEP IPPLLESVID HFVTWRLIPE YKRPNGCVIN FFEEGEYSQP
361 FLKPPHLEQP ISTLVLSEST MAYGRILSSD NEGNFRGPLT LSLKQGSLLV MRGNSADMAR
421 HVMCPSQNKR VSITFFRIRP DTYHNHSQPN SPRNDGVMTM WQPYQMTPTP FLNGYDHSID
481 MMPKLGVLRP PMVMMAPPPV QPMILPSPNV MGTGGGTGVF LPWASVNSSR KHVKHLPPRA
541 QKKRLLPLPP AASSSPAGGS TSEPVITVG
//