LOCUS AEE82252.1 454 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GTP binding Elongation factor Tu
family protein protein.
ACCESSION CP002687-609
PROTEIN_ID AEE82252.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G02930"
/gene_synonym="T4I9.19"
/inference="Similar to RNA sequence,
EST:INSD:BP560436.2,INSD:F14375.1,INSD:ES036167.1,
INSD:DR254111.1,INSD:AV557599.1,INSD:ES086097.1,
INSD:AV524866.1,INSD:BP581355.1,INSD:AV808107.1,
INSD:AV536544.1,INSD:DR254120.1,INSD:BP663395.1,
INSD:EH937475.1,INSD:AV566795.1,INSD:ES171846.1,
INSD:DR254109.1,INSD:DR254117.1,INSD:EG499469.1,
INSD:BP800242.1,INSD:EL191290.1,INSD:BP782375.1,
INSD:AV537805.1,INSD:BP854851.1,INSD:EL019841.1,
INSD:AV805907.1,INSD:BP604539.1,INSD:AV829655.1,
INSD:T04276.1,INSD:AV518285.1,INSD:DR254112.1,
INSD:EL075884.1,INSD:AV829133.1,INSD:EL124903.1,
INSD:ES025730.1,INSD:CB254749.1,INSD:DR254119.1,
INSD:EG478123.1,INSD:CF653100.1,INSD:AV549829.1,
INSD:AV807241.1,INSD:ES110434.1,INSD:EG519940.1,
INSD:DR254121.1,INSD:BP608781.1,INSD:ES070579.1,
INSD:DR254116.1,INSD:AI099908.1,INSD:DR254114.1,
INSD:ES011522.1,INSD:BP803258.1,INSD:EG478116.1,
INSD:DR374935.1,INSD:BP790261.1,INSD:EH817216.1,
INSD:ES060298.1,INSD:DR254115.1,INSD:BP829698.1,
INSD:ES190487.1,INSD:EL257443.1,INSD:BP580527.1,
INSD:BP569507.1,INSD:T46137.1,INSD:EL185201.1,
INSD:AV809145.1,INSD:CB254654.1,INSD:AV526516.1,
INSD:BP828407.1,INSD:AI998247.1,INSD:BP584116.1,
INSD:T20806.1,INSD:DR254113.1,INSD:BP575138.1,
INSD:BP668610.1,INSD:DR254110.1,INSD:BP622122.1,
INSD:BP581088.1,INSD:BP574429.1,INSD:ES207529.1,
INSD:BP799997.1,INSD:ES190913.1,INSD:BP790661.1,
INSD:DR254108.1,INSD:BP660054.1,INSD:EL328979.1"
/inference="Similar to RNA sequence,
mRNA:INSD:X89227.1,INSD:AK227027.1,INSD:BT008755.1,
INSD:AY136421.1,INSD:BX827237.1,INSD:BX827558.1"
/note="GTP binding Elongation factor Tu family protein;
FUNCTIONS IN: translation elongation factor activity,
cobalt ion binding, zinc ion binding, ATP binding;
INVOLVED IN: response to cadmium ion; LOCATED IN:
mitochondrion, cell wall; EXPRESSED IN: 27 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Translation elongation factor
EFTu/EF1A, bacterial/organelle (InterPro:IPR004541),
Translation elongation factor EFTu/EF1A, C-terminal
(InterPro:IPR004160), Small GTP-binding protein
(InterPro:IPR005225), Translation elongation factor
EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation
elongation factor EF1A/initiation factor IF2gamma,
C-terminal (InterPro:IPR009001), Protein synthesis factor,
GTP-binding (InterPro:IPR000795), Translation
elongation/initiation factor/Ribosomal, beta-barrel
(InterPro:IPR009000); BEST Arabidopsis thaliana protein
match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has
89361 Blast hits to 89296 proteins in 17600 species:
Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi -
9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021
(source: NCBI BLink)."
/db_xref="TAIR:AT4G02930"
/db_xref="Araport:AT4G02930"
intron_pos 64:2 (1/11)
intron_pos 90:0 (2/11)
intron_pos 121:0 (3/11)
intron_pos 146:0 (4/11)
intron_pos 181:0 (5/11)
intron_pos 211:1 (6/11)
intron_pos 280:0 (7/11)
intron_pos 308:0 (8/11)
intron_pos 331:0 (9/11)
intron_pos 352:0 (10/11)
intron_pos 432:1 (11/11)
BEGIN
1 MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT
61 FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI AFDEIDKAPE EKKRGITIAT
121 AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ
181 VGVPSLVCFL NKVDVVDDPE LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE
241 IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301 EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK
361 TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG KVELPENVKM VMPGDNVTAV
421 FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT
//