LOCUS AEE82226.1 506 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNI-like superfamily protein protein.
ACCESSION CP002687-573
PROTEIN_ID AEE82226.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G02760"
/gene_synonym="T5J8.6"
/gene_synonym="T5J8_6"
/inference="Similar to RNA sequence,
EST:INSD:DR271199.1,INSD:CB255004.1,INSD:CO048787.1,
INSD:CB255002.1,INSD:DR271200.1,INSD:CB255143.1,
INSD:ES106626.1"
/note="RNI-like superfamily protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; BEST Arabidopsis thaliana protein match is:
F-box/RNI-like superfamily protein (TAIR:AT4G02740.1); Has
491 Blast hits to 434 proteins in 99 species: Archae - 0;
Bacteria - 4; Metazoa - 330; Fungi - 45; Plants - 97;
Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink)."
/db_xref="TAIR:AT4G02760"
/db_xref="Araport:AT4G02760"
intron_pos 127:0 (1/12)
intron_pos 185:2 (2/12)
intron_pos 219:2 (3/12)
intron_pos 256:2 (4/12)
intron_pos 285:1 (5/12)
intron_pos 323:0 (6/12)
intron_pos 344:2 (7/12)
intron_pos 369:0 (8/12)
intron_pos 390:0 (9/12)
intron_pos 409:2 (10/12)
intron_pos 438:2 (11/12)
intron_pos 489:2 (12/12)
BEGIN
1 MDAPNPKRPC LVPLGTSSIE NPCSLPIAPD FNQSNIDLTI SSFLSLSDLP LFSLPLSIGC
61 SFDRVLDNVI PSIAGTSRDE FDQDRFLDRT LQLASLLYKS TKRCIRKRAT LQNSTSWPLL
121 PELTIKVFSM LDTKSLMQAS ACCTMFNKCA MDRVCYSHID LTTAAEDVDN GVVCVMIHRA
181 GKELRSLKLG SISSSAEPTT SLLTRSCLTP LTFNHGFTGG HLRSLHLYHL RMIDCGSLSP
241 VLSACLNLTD LKIVGLDNPL EQLGLLTRNC RLIEHLFIEI YGAAGLITDS SLLEFAANCP
301 NLSSISLLGF LLNDAILQKL IKGFRRLKHI NLSSSPEISG CFFRGLELCG KDSPLETLIL
361 RDCYILKESE VLLFLNSLLA GDFKYIRLID VSNVDGLVCD GGNRTFEPRF PIEELKKQRS
421 NVTFVAIFES QSSLSSSRFP LEELNKERPG LTFVAEFRSP SPSESDVRSP SPSSSSDSSS
481 SSDSSSSSSS GESSDESGTE EEEDED
//