LOCUS AEE82223.1 479 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like superfamily protein protein.
ACCESSION CP002687-571
PROTEIN_ID AEE82223.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G02740"
/gene_synonym="T5J8.4"
/gene_synonym="T5J8_4"
/inference="Similar to RNA sequence,
EST:INSD:BP607424.1,INSD:EH808232.1,INSD:DR273220.1,
INSD:BP600508.1,INSD:EL064049.1,INSD:EL268636.1,
INSD:BE521596.1,INSD:ES135940.1,INSD:DR273223.1,
INSD:EL329880.1,INSD:ES124932.1,INSD:BE521595.1,
INSD:EH974593.1,INSD:DR273221.1,INSD:EL223342.1,
INSD:DR273224.1,INSD:EL055147.1,INSD:AU227178.1,
INSD:ES062238.1,INSD:ES154948.1,INSD:DR273225.1,
INSD:BP616670.1,INSD:EH799159.1,INSD:ES033472.1,
INSD:ES192868.1,INSD:EL173754.1,INSD:EL183487.1,
INSD:ES180095.1,INSD:BP817171.1,INSD:BP619086.1,
INSD:DR380248.1,INSD:DR273222.1,INSD:EL311891.1,
INSD:BP601466.1,INSD:BP862484.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK175207.1,INSD:AK228382.1"
/note="F-box/RNI-like superfamily protein; CONTAINS
InterPro DOMAIN/s: F-box domain, Skp2-like
(InterPro:IPR022364); BEST Arabidopsis thaliana protein
match is: RNI-like superfamily protein (TAIR:AT4G02760.2);
Has 1857 Blast hits to 1364 proteins in 199 species:
Archae - 3; Bacteria - 120; Metazoa - 715; Fungi - 206;
Plants - 319; Viruses - 25; Other Eukaryotes - 469
(source: NCBI BLink)."
/db_xref="TAIR:AT4G02740"
/db_xref="Araport:AT4G02740"
intron_pos 106:0 (1/11)
intron_pos 164:2 (2/11)
intron_pos 200:2 (3/11)
intron_pos 237:2 (4/11)
intron_pos 267:1 (5/11)
intron_pos 308:0 (6/11)
intron_pos 329:2 (7/11)
intron_pos 354:0 (8/11)
intron_pos 375:0 (9/11)
intron_pos 395:2 (10/11)
intron_pos 418:2 (11/11)
BEGIN
1 MDPPTQSHNS VRTVPGSNHS HTDLIISSFL SFPDSSPISI SNSFDRVLDR ALASASADES
61 VQDRLVDRTL ELASLLLDST RRCFRKRASV HNSNSWSLPP ELTIKVFSML DTKSMMQAAV
121 CCTMFNKCAM DRLCYSHIDL TTSARYADKG VVSTMINRAG KELRSLKLGR VVRTAGSDSA
181 APLLSGSCLS PLAYNHGFLG SRLRSLRLYN LRPIKYRSLC DALSVCPNIT DLRIVGLYNL
241 TEELFNSLTK KCRLIEHLFL ETYGYPRTLE SKAGSSLVEF VTNCPNLTSL TLIRFGLTDD
301 WARNLAESCR KLKYLNLSRS PTIKGRFLRE LGLSCKENLL KTLILRSCPK LQEKEVLEFC
361 NSLLTGNFKS IRQIDVSSNS GLASSDRGKR CNKPNFPLER LKEERSDVTF VADFPSTSSG
421 KRYGVCDEEE LRLIEMMEAE DDEVDEEDDS DDDTDDVSDE DESENDDDMG MGFDVDYLL
//