LOCUS AEE82212.1 402 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana indeterminate(ID)-domain 12 protein.
ACCESSION CP002687-556
PROTEIN_ID AEE82212.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="IDD12"
/locus_tag="AT4G02670"
/gene_synonym="AtIDD12"
/gene_synonym="indeterminate(ID)-domain 12"
/gene_synonym="T10P11.4"
/gene_synonym="T10P11_4"
/inference="Similar to RNA sequence,
EST:INSD:ES079822.1,INSD:ES063465.1,INSD:ES171568.1,
INSD:ES111495.1,INSD:ES079124.1,INSD:EH847298.1,
INSD:EL990286.1,INSD:ES109111.1,INSD:ES195518.1,
INSD:ES016855.1,INSD:ES163876.1,INSD:ES001311.1,
INSD:ES116042.1"
/note="indeterminate(ID)-domain 12 (IDD12); FUNCTIONS IN:
sequence-specific DNA binding transcription factor
activity, zinc ion binding, nucleic acid binding; INVOLVED
IN: regulation of transcription; LOCATED IN:
intracellular, chloroplast; EXPRESSED IN: shoot apex,
embryo, flower, pedicel, seed; EXPRESSED DURING: 4
anthesis, C globular stage, petal differentiation and
expansion stage, E expanded cotyledon stage, D bilateral
stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like
(InterPro:IPR015880), Zinc finger, C2H2-type
(InterPro:IPR007087), Zinc finger, double-stranded RNA
binding (InterPro:IPR022755); BEST Arabidopsis thaliana
protein match is: C2H2-like zinc finger protein
(TAIR:AT5G66730.1); Has 45871 Blast hits to 18418 proteins
in 241 species: Archae - 0; Bacteria - 0; Metazoa - 43560;
Fungi - 264; Plants - 729; Viruses - 2; Other Eukaryotes -
1316 (source: NCBI BLink)."
/db_xref="TAIR:AT4G02670"
/db_xref="Araport:AT4G02670"
intron_pos 63:1 (1/2)
intron_pos 196:2 (2/2)
BEGIN
1 MFSSHSLSYK LSSLSTEASA SSGNNTLSTI QEFSGFHNVI SSVCTHTETH KPKKKRGLPG
61 NPDPDAEVIA LSPKTLLATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL KQKNTKEQQK
121 KKVYVCPETN CAHHHPSRAL GDLTGIKKHF CRKHGEKKWK CEKCSKFYAV QSDWKAHTKI
181 CGTRDYRCDC GTLFSRKDTF ITHRAFCDAL AEESARLHST SSSNLTNPNP NFQGHHFMFN
241 KSSSLLFTSS PLFIEPSLST AALSTPPTAA LSATALLQKA TSLSSTTFGG GGQTRSIGHH
301 RHLTNVNEFL GVDRVMMTSA SSSEYDQLVV DGFTSTWQKA DRLTRDFLGL TGHGGHVSVR
361 PGDMLEYAGG VAFPMSAYDT ESHDHSFQKA YDHLGFSGAH RM
//