LOCUS AEE82201.1 247 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002687-539
PROTEIN_ID AEE82201.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="UNE12"
/locus_tag="AT4G02590"
/gene_synonym="T10P11.13"
/gene_synonym="T10P11_13"
/gene_synonym="unfertilized embryo sac 12"
/inference="Similar to RNA sequence,
EST:INSD:BP590065.1,INSD:BP599057.1,INSD:AV797490.1,
INSD:ES035468.1,INSD:BP601705.1,INSD:BP566980.1,
INSD:BP581270.1,INSD:ES056672.1,INSD:ES029135.1,
INSD:ES020916.1,INSD:ES066669.1,INSD:EL186671.1,
INSD:EH816538.1,INSD:ES108938.1,INSD:ES120290.1,
INSD:BP571711.1,INSD:EG499077.1,INSD:BP794646.1,
INSD:BP573736.1,INSD:EL036522.1,INSD:ES022452.1,
INSD:ES026216.1,INSD:BP579985.1,INSD:BP782922.1,
INSD:BP633109.1,INSD:EH932792.1,INSD:EH829709.1,
INSD:BP780246.1,INSD:AV811175.1,INSD:ES176073.1,
INSD:ES117198.1,INSD:EL017759.1,INSD:BP573889.1,
INSD:AI996695.1,INSD:BP567345.1,INSD:AV440489.1,
INSD:ES186095.1,INSD:BP642584.1,INSD:DR370705.1,
INSD:EG478119.1,INSD:AV818404.1,INSD:EH989269.1,
INSD:BX835418.1,INSD:ES013907.1,INSD:ES118463.1,
INSD:AI099789.1,INSD:ES130189.1,INSD:EG499078.1,
INSD:BP780163.1,INSD:BP789673.1,INSD:BP782198.1,
INSD:EL254536.1,INSD:BP591753.1,INSD:EL317191.1,
INSD:BP607136.1,INSD:EG512915.1,INSD:BP589054.1,
INSD:BP592969.1,INSD:ES028505.1,INSD:EG499072.1,
INSD:BP604896.1,INSD:ES113315.1,INSD:ES121172.1,
INSD:BP626626.1,INSD:EH803356.1,INSD:ES053856.1,
INSD:ES099089.1,INSD:EL284668.1,INSD:ES117038.1,
INSD:ES168698.1,INSD:BP663685.1,INSD:BP577807.1,
INSD:EH808194.1,INSD:AV534801.1,INSD:ES121648.1,
INSD:BP790466.1,INSD:BP629409.1,INSD:ES052936.1,
INSD:ES046579.1,INSD:AV807313.1"
/note="unfertilized embryo sac 12 (UNE12); FUNCTIONS IN:
DNA binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: double fertilization forming
a zygote and endosperm, regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G02590"
/db_xref="Araport:AT4G02590"
intron_pos 59:0 (1/5)
intron_pos 100:0 (2/5)
intron_pos 122:0 (3/5)
intron_pos 144:0 (4/5)
intron_pos 171:0 (5/5)
BEGIN
1 MGGLGGSGPT GFHNQMFPLG LSLDQGKGPG FLRPEGGHGS GKRFSDDVVD NRCSSMKPVF
61 HGQPMQQPPP SAPHQPTSIR PRVRARRGQA TDPHSIAERL RRERIAERIR ALQELVPTVN
121 KTDRAAMIDE IVDYVKFLRL QVKVLSMSRL GGAGAVAPLV TDMPLSSSVE DETGEGGRTP
181 QPAWEKWSND GTERQVAKLM EENVGAAMQL LQSKALCMMP ISLAMAIYHS QPPDTSSVVK
241 PENNPPQ
//