LOCUS AEE82199.1 310 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002687-537
PROTEIN_ID AEE82199.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="UNE12"
/locus_tag="AT4G02590"
/gene_synonym="T10P11.13"
/gene_synonym="T10P11_13"
/gene_synonym="unfertilized embryo sac 12"
/inference="Similar to RNA sequence,
EST:INSD:BP590065.1,INSD:BP599057.1,INSD:T44193.1,
INSD:BP566980.1,INSD:ES056661.1,INSD:BP581270.1,
INSD:ES056672.1,INSD:ES029135.1,INSD:ES020916.1,
INSD:ES066669.1,INSD:EL186671.1,INSD:ES108938.1,
INSD:BX839073.1,INSD:EG509721.1,INSD:ES120290.1,
INSD:EG509715.1,INSD:DR222185.1,INSD:EG499077.1,
INSD:BP571711.1,INSD:BP794646.1,INSD:ES022452.1,
INSD:BU636783.1,INSD:BP579985.1,INSD:EH932792.1,
INSD:AV811175.1,INSD:ES176073.1,INSD:ES117198.1,
INSD:BP573889.1,INSD:AI996695.1,INSD:DR222188.1,
INSD:ES186095.1,INSD:EG478119.1,INSD:EG512852.1,
INSD:EG512863.1,INSD:ES118463.1,INSD:EG512859.1,
INSD:EG499078.1,INSD:BP789673.1,INSD:BP782198.1,
INSD:EL254536.1,INSD:EL317191.1,INSD:DR222186.1,
INSD:DR222187.1,INSD:CB252647.1,INSD:BP607136.1,
INSD:EL002566.1,INSD:EG453784.1,INSD:EG453785.1,
INSD:EL059897.1,INSD:EL146967.1,INSD:ES028505.1,
INSD:EG499072.1,INSD:ES113315.1,INSD:ES121172.1,
INSD:CF652995.1,INSD:EG478141.1,INSD:EL989032.1,
INSD:ES053856.1,INSD:EG512862.1,INSD:ES099089.1,
INSD:EL284668.1,INSD:ES117038.1,INSD:ES168698.1,
INSD:BP846237.1,INSD:BP663685.1,INSD:BP577807.1,
INSD:ES121648.1,INSD:BP790466.1,INSD:AV807313.1,
INSD:AV797490.1,INSD:ES035468.1,INSD:BP601705.1,
INSD:T21978.1,INSD:ES153611.1,INSD:EH816538.1,
INSD:BP859162.1,INSD:EG509736.1,INSD:BP809566.1,
INSD:EG512851.1,INSD:BP573736.1,INSD:EL036522.1,
INSD:ES026216.1,INSD:BP782922.1,INSD:AI994508.1,
INSD:BP633109.1,INSD:EH829709.1,INSD:BP780246.1,
INSD:EH965691.1,INSD:EL017759.1,INSD:BP567345.1,
INSD:AV440489.1,INSD:BP642584.1,INSD:DR370705.1,
INSD:AV818404.1,INSD:EH989269.1,INSD:DR222190.1,
INSD:EG512858.1,INSD:BX835418.1,INSD:ES013907.1,
INSD:BX839627.1,INSD:AI099789.1,INSD:EL248793.1,
INSD:ES130189.1,INSD:BP780163.1,INSD:BP591753.1,
INSD:EG509726.1,INSD:EG512868.1,INSD:AV827192.1,
INSD:BP589054.1,INSD:BP592969.1,INSD:EG512860.1,
INSD:EG512867.1,INSD:BP604896.1,INSD:DR222193.1,
INSD:DR222194.1,INSD:BP626626.1,INSD:EH803356.1,
INSD:CB258734.1,INSD:EG512861.1,INSD:EH808194.1,
INSD:AV534801.1,INSD:DR222191.1,INSD:DR222189.1,
INSD:BP629409.1,INSD:ES052936.1,INSD:ES046579.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX826943.1,INSD:AF488592.1,INSD:AY088218.1,
INSD:AY143951.1,INSD:AF367328.1,INSD:BX826455.1"
/note="unfertilized embryo sac 12 (UNE12); FUNCTIONS IN:
DNA binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: double fertilization forming
a zygote and endosperm, regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (TAIR:AT1G03040.1); Has 2959 Blast
hits to 2953 proteins in 110 species: Archae - 0; Bacteria
- 0; Metazoa - 29; Fungi - 7; Plants - 2922; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="TAIR:AT4G02590"
/db_xref="Araport:AT4G02590"
intron_pos 122:0 (1/5)
intron_pos 163:0 (2/5)
intron_pos 185:0 (3/5)
intron_pos 207:0 (4/5)
intron_pos 234:0 (5/5)
BEGIN
1 MASNNPHDNL SDQTPSDDFF EQILGLPNFS ASSAAGLSGV DGGLGGGAPP MMLQLGSGEE
61 GSHMGGLGGS GPTGFHNQMF PLGLSLDQGK GPGFLRPEGG HGSGKRFSDD VVDNRCSSMK
121 PVFHGQPMQQ PPPSAPHQPT SIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP
181 TVNKTDRAAM IDEIVDYVKF LRLQVKVLSM SRLGGAGAVA PLVTDMPLSS SVEDETGEGG
241 RTPQPAWEKW SNDGTERQVA KLMEENVGAA MQLLQSKALC MMPISLAMAI YHSQPPDTSS
301 VVKPENNPPQ
//