LOCUS AEE82175.1 923 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA mismatch repair protein protein.
ACCESSION CP002687-503
PROTEIN_ID AEE82175.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PMS1"
/locus_tag="AT4G02460"
/gene_synonym="AtPMS1"
/gene_synonym="ATPMS1"
/gene_synonym="POSTMEIOTIC SEGREGATION 1"
/gene_synonym="T14P8.6"
/gene_synonym="T14P8_6"
/inference="Similar to RNA sequence,
EST:INSD:ES160153.1,INSD:ES174176.1,INSD:ES178469.1,
INSD:EG505176.1,INSD:AU238630.1,INSD:EL054823.1,
INSD:EH800452.1,INSD:EL263098.1,INSD:ES150894.1,
INSD:ES124693.1,INSD:ES089554.1,INSD:AU229826.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY047228.1"
/note="POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN:
mismatched DNA binding, ATP binding; INVOLVED IN: mismatch
repair, fruit development, seed development, DNA
recombination, pollen development; LOCATED IN: nucleus;
EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch
repair, conserved site (InterPro:IPR014762), ATPase-like,
ATP-binding domain (InterPro:IPR003594), DNA mismatch
repair protein, C-terminal (InterPro:IPR013507), MutL,
C-terminal, dimerisation (InterPro:IPR014790), DNA
mismatch repair protein, N-terminal (InterPro:IPR014763),
Ribosomal protein S5 domain 2-type fold
(InterPro:IPR020568), DNA mismatch repair protein
(InterPro:IPR002099), Post Meiotic Segregation 2
(InterPro:IPR015434), Ribosomal protein S5 domain 2-type
fold, subgroup (InterPro:IPR014721); BEST Arabidopsis
thaliana protein match is: MUTL-homologue 1
(TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins
in 2377 species: Archae - 138; Bacteria - 7516; Metazoa -
568; Fungi - 666; Plants - 148; Viruses - 0; Other
Eukaryotes - 1435 (source: NCBI BLink)."
/db_xref="TAIR:AT4G02460"
/db_xref="Araport:AT4G02460"
intron_pos 84:0 (1/10)
intron_pos 192:0 (2/10)
intron_pos 572:0 (3/10)
intron_pos 664:2 (4/10)
intron_pos 707:0 (5/10)
intron_pos 730:0 (6/10)
intron_pos 754:2 (7/10)
intron_pos 776:2 (8/10)
intron_pos 811:1 (9/10)
intron_pos 872:0 (10/10)
BEGIN
1 MQGDSSPSPT TTSSPLIRPI NRNVIHRICS GQVILDLSSA VKELVENSLD AGATSIEINL
61 RDYGEDYFQV IDNGCGISPT NFKVLALKHH TSKLEDFTDL LNLTTYGFRG EALSSLCALG
121 NLTVETRTKN EPVATLLTFD HSGLLTAEKK TARQIGTTVT VRKLFSNLPV RSKEFKRNIR
181 KEYGKLVSLL NAYALIAKGV RFVCSNTTGK NPKSVVLNTQ GRGSLKDNII TVFGISTFTS
241 LQPVSICVSE DCRVEGFLSK PGQGTGRNLA DRQYFFINGR PVDMPKVSKL VNELYKDTSS
301 RKYPVTILDF IVPGGACDLN VTPDKRKVFF SDETSVIGSL REGLNEIYSS SNASYIVNRF
361 EENSEQPDKA GVSSFQKKSN LLSEGIVLDV SSKTRLGEAI EKENPSLREV EIDNSSPMEK
421 FKFEIKACGT KKGEGSLSVH DVTHLDKTPS KGLPQLNVTE KVTDASKDLS SRSSFAQSTL
481 NTFVTMGKRK HENISTILSE TPVLRNQTSS YRVEKSKFEV RALASRCLVE GDQLDDMVIS
541 KEDMTPSERD SELGNRISPG TQADNVERHE REHEKPIRFE EPTSDNTLTK GDVERVSEDN
601 PRCSQPLRSV ATVLDSPAQS TGPKMFSTLE FSFQNLRTRR LERLSRLQST GYVSKCMNTP
661 QPKKCFAAAT LELSQPDDEE RKARALAAAT SELERLFRKE DFRRMQVLGQ FNLGFIIAKL
721 ERDLFIVDQH AADEKFNFEH LARSTVLNQQ PLLQPLNLEL SPEEEVTVLM HMDIIRENGF
781 LLEENPSAPP GKHFRLRAIP YSKNITFGVE DLKDLISTLG DNHGECSVAS SYKTSKTDSI
841 CPSRVRAMLA SRACRSSVMI GDPLRKNEMQ KIVEHLADLE SPWNCPHGRP TMRHLVDLTT
901 LLTLPDDDNV NDDDDDDATI SLA
//