LOCUS AEE82164.1 855 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana U3 ribonucleoprotein (Utp) family
protein protein.
ACCESSION CP002687-490
PROTEIN_ID AEE82164.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G02400"
/gene_synonym="T14P8.20"
/gene_synonym="T14P8_20"
/inference="Similar to RNA sequence,
EST:INSD:ES116689.1,INSD:ES175382.1,INSD:ES072911.1,
INSD:EH919198.1,INSD:BP780528.1,INSD:DR373976.1,
INSD:ES045361.1,INSD:EG518871.1,INSD:AV805633.1,
INSD:EH808016.1,INSD:ES094169.1,INSD:AV799621.1,
INSD:EH957853.1,INSD:AV800412.1,INSD:EH812533.1,
INSD:BP798110.1,INSD:EG513493.1,INSD:BP786924.1,
INSD:EG518870.1,INSD:ES214991.1,INSD:ES124562.1,
INSD:AV782454.1,INSD:EG513494.1,INSD:EL062559.1,
INSD:EH883795.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK230231.1"
/note="U3 ribonucleoprotein (Utp) family protein;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
rRNA processing; LOCATED IN: small-subunit processome;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit
processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis
thaliana protein match is: U3 ribonucleoprotein (Utp)
family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to
4514 proteins in 366 species: Archae - 14; Bacteria - 554;
Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146;
Other Eukaryotes - 2896 (source: NCBI BLink)."
/db_xref="TAIR:AT4G02400"
/db_xref="Araport:AT4G02400"
intron_pos 90:0 (1/10)
intron_pos 133:1 (2/10)
intron_pos 294:0 (3/10)
intron_pos 367:0 (4/10)
intron_pos 472:0 (5/10)
intron_pos 575:0 (6/10)
intron_pos 602:0 (7/10)
intron_pos 628:0 (8/10)
intron_pos 755:0 (9/10)
intron_pos 799:0 (10/10)
BEGIN
1 MGEKRKSTSK TLAKNKKRKG PHLPNSILKT IANEKRPLNS DEDDDEIDSD DENVDLYEYE
61 EGVPEEESKK NNRYDRVDNY DYELPEDFED ENVESDDDED GGNSENEEGE GDDDRHTRML
121 QGLTGMPSAA FQEESKKRPV LYTEAYPESE FNPTRDVLEG KGLISVEDLL APLEGKPGFN
181 DLNKRINRMQ KDTQSVVHAP LPKPERERLE RKAVKGLVEK DFNKWVHLVK RNREAPTVYF
241 NQPVNVGYST VGAIASEFQP RTEFEKKMAS VLKDNELGEA HKEDGAKLLE LNEVSMEDHI
301 KYRDHIAKMR SLLFRHELKS KRIKKIKSKT YHRLKGKDLK KSAMGALMDP EMAKEEAIKQ
361 ETRRVEERMT LKHKNTGKWA KRMLSRGLTE RYDGTRAAIS EQLQINATLS RKMNSTNDGS
421 SSDESDDEEE LSCGSDQDTP SKLIAKAREK TLKTMEDDDV PNSGLLSLPF MARAMKKKNE
481 EANEEAKRAF GEYKELENFG GEDNPKKSAD VSGRRVFGAT SKVEAPKESK KDSDNFYDNS
541 DSDNDMEGIE NNDLGAVGDT ASPARNTGAI TETEKCCGDV ENPASKTTFD VALFASGSWK
601 KMKGSQNAES KKAPKTRVPI SKGQDKKESR DEESEDSESE AEQMVDGILT SASKETYEIP
661 SQAELIQRAF AGDDVVEEFE KDKQEVLNQE VPEPEKPVLV PGWGQWTNVQ KKRGLPSWMV
721 REHEDANKKR KLDLKTRKDY RLRNVIISEK VDKKADKLHT TTLPFPYTSK EVFEHSMRMP
781 IGPEFNPATI VGALNRPEVV KKAGVIIKPV KFEEVNPNEK ADDENPRSHQ KQRPKKGSKT
841 SKGQGKNKSK LKTKA
//