LOCUS AEE82151.1 516 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana glycosyl hydrolase 9B13 protein.
ACCESSION CP002687-473
PROTEIN_ID AEE82151.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="GH9B13"
/locus_tag="AT4G02290"
/gene_synonym="AtGH9B13"
/gene_synonym="glycosyl hydrolase 9B13"
/gene_synonym="T2H3.5"
/gene_synonym="T2H3_5"
/inference="Similar to RNA sequence,
EST:INSD:DR380971.1,INSD:AV547332.1,INSD:EL986068.1,
INSD:BP616720.1,INSD:AV825930.1,INSD:ES114646.1,
INSD:ES081191.1,INSD:BP783065.1,INSD:ES106991.1,
INSD:AV548289.1,INSD:ES118732.1,INSD:ES202182.1,
INSD:AV801952.1,INSD:BP831501.1,INSD:BP791470.1,
INSD:DR298988.1,INSD:AV544635.1,INSD:EL988719.1,
INSD:ES117089.1,INSD:ES161255.1,INSD:ES195520.1,
INSD:AI993079.1,INSD:DR298989.1,INSD:BP812310.1,
INSD:BP780607.1,INSD:ES117511.1,INSD:AV814086.1,
INSD:EL972152.1,INSD:AV534636.1,INSD:ES103811.1,
INSD:EH911738.1,INSD:EL970936.1,INSD:AA395053.1,
INSD:EL990840.1,INSD:ES146007.1,INSD:EL216619.1,
INSD:ES018643.1,INSD:EL973788.1,INSD:AV553044.1,
INSD:ES208490.1,INSD:EL997279.1,INSD:T44100.1,
INSD:ES018680.1,INSD:AV786665.1,INSD:AV805802.1,
INSD:ES145519.1,INSD:DR298987.1,INSD:BP786957.1,
INSD:ES017123.1,INSD:ES196535.1,INSD:ES006368.1,
INSD:ES089088.1,INSD:ES104066.1,INSD:BP620921.1,
INSD:ES172999.1,INSD:EL971282.1,INSD:ES081870.1,
INSD:AV537738.1,INSD:EL284217.1,INSD:ES215839.1,
INSD:AV555816.1,INSD:AV537625.1,INSD:ES147493.1,
INSD:AV533017.1,INSD:EL970746.1,INSD:DR298982.1,
INSD:ES121385.1,INSD:ES165706.1,INSD:ES168935.1,
INSD:ES025526.1,INSD:T04837.1,INSD:DR298990.1,
INSD:ES017047.1,INSD:AV801094.1,INSD:ES026036.1,
INSD:ES213526.1,INSD:ES056758.1,INSD:ES143246.1,
INSD:ES054968.1,INSD:ES194762.1,INSD:ES201994.1,
INSD:AV792966.1,INSD:ES080090.1,INSD:ES188500.1,
INSD:AA721861.1,INSD:DR298984.1,INSD:ES099522.1,
INSD:ES136546.1,INSD:ES141736.1,INSD:EL975069.1,
INSD:ES112435.1,INSD:AV539698.1,INSD:AV805042.1,
INSD:AV532459.1,INSD:ES124531.1,INSD:ES068710.1,
INSD:ES183396.1,INSD:EL986634.1,INSD:AV530921.1,
INSD:ES034051.1,INSD:ES173353.1,INSD:DR298983.1,
INSD:EL985397.1,INSD:ES013318.1,INSD:EL967324.1,
INSD:AV532521.1,INSD:ES116410.1,INSD:ES176647.1,
INSD:ES213273.1,INSD:EL225071.1,INSD:ES031603.1,
INSD:EL972201.1,INSD:EL969442.1,INSD:CB265114.1,
INSD:BP615481.1,INSD:ES097260.1,INSD:EL979330.1,
INSD:DR298986.1,INSD:EG468441.1,INSD:ES126859.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX826633.1,INSD:AY101518.1,INSD:AY079162.1"
/note="glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN:
hydrolase activity, hydrolyzing O-glycosyl compounds,
catalytic activity; INVOLVED IN: carbohydrate metabolic
process; LOCATED IN: endomembrane system; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 9 growth stages;
CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase
(InterPro:IPR012341), Glycoside hydrolase, family 9,
active site (InterPro:IPR018221), Six-hairpin
glycosidase-like (InterPro:IPR008928), Glycoside
hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis
thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1);
Has 1736 Blast hits to 1717 proteins in 249 species:
Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17;
Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source:
NCBI BLink)."
/db_xref="TAIR:AT4G02290"
/db_xref="Araport:AT4G02290"
intron_pos 94:0 (1/6)
intron_pos 230:0 (2/6)
intron_pos 261:0 (3/6)
intron_pos 315:0 (4/6)
intron_pos 352:1 (5/6)
intron_pos 407:0 (6/6)
BEGIN
1 MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS
61 ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY YDAGDNIKFG FPMAFTTTML
121 SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD
181 TVRSVFKVDK NIPGSDVAAE TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT
241 YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301 WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD
361 ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR SIAKRQVDYL LGDNPLRMSY
421 MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD
481 RFPDERSDYE QSEPATYINS PLVGALAYFA HAYGQL
//