LOCUS AEE82146.1 816 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RELA/SPOT homolog 1 protein.
ACCESSION CP002687-470
PROTEIN_ID AEE82146.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RSH1"
/locus_tag="AT4G02260"
/gene_synonym="AT-RSH1"
/gene_synonym="ATRSH1"
/gene_synonym="RELA-SPOT HOMOLOG 1"
/gene_synonym="RELA/SPOT homolog 1"
/gene_synonym="RELA/SPOT HOMOLOG 1"
/gene_synonym="T2H3.10"
/gene_synonym="T2H3_10"
/inference="Similar to RNA sequence,
EST:INSD:DR350965.1,INSD:EH815946.1,INSD:EH830780.1,
INSD:EH809122.1,INSD:BP791518.1,INSD:EL263286.1,
INSD:BP788063.1,INSD:AV522767.1,INSD:EH988743.1,
INSD:BP648403.1,INSD:BP787069.1,INSD:Z34756.1,
INSD:EL284338.1,INSD:EL311947.1,INSD:EH850426.1,
INSD:DR343517.1,INSD:BP788625.1,INSD:EL172854.1,
INSD:BP793628.1,INSD:EL126047.1,INSD:EL096550.1,
INSD:EH928567.1,INSD:BP792339.1,INSD:EH827675.1,
INSD:AV528285.1,INSD:AV805829.1,INSD:BP784640.1,
INSD:EL328969.1,INSD:BP790484.1"
/note="RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic
activity; INVOLVED IN: response to wounding; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Metal-dependent phosphohydrolase, HD subdomain
(InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS
(InterPro:IPR004095), Metal-dependent phosphohydrolase, HD
domain (InterPro:IPR003607), Beta-grasp fold,
ferredoxin-type (InterPro:IPR012675), RelA/SpoT
(InterPro:IPR007685); BEST Arabidopsis thaliana protein
match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT4G02260"
/db_xref="Araport:AT4G02260"
intron_pos 9:1 (1/20)
intron_pos 73:0 (2/20)
intron_pos 134:0 (3/20)
intron_pos 156:0 (4/20)
intron_pos 187:0 (5/20)
intron_pos 231:0 (6/20)
intron_pos 265:0 (7/20)
intron_pos 291:0 (8/20)
intron_pos 315:0 (9/20)
intron_pos 351:0 (10/20)
intron_pos 383:2 (11/20)
intron_pos 404:0 (12/20)
intron_pos 425:0 (13/20)
intron_pos 444:0 (14/20)
intron_pos 478:0 (15/20)
intron_pos 531:0 (16/20)
intron_pos 575:0 (17/20)
intron_pos 604:0 (18/20)
intron_pos 628:0 (19/20)
intron_pos 657:0 (20/20)
BEGIN
1 MTSASSMSVS VECVNICNLT KGDGNARSDC SALSCAWKAP RALTGFLAST AHPPVCSVYS
61 CGRNGRKSRM KACAWQRYEY EVGFSEAPYF VNVRNILKSR LSCGGHKRWE LYCVSAESSS
121 GASSDVTVET LWEDLFPSIS YLPRKELEFV QKGLKLAFEA HHGQKRRSGE PFIIHPVAVA
181 RILGELELDW ESIVAGLLHD TVEDTNFITF EKIEEEFGAT VRHIVEGETK VSKLGKLKCK
241 TESETIQDVK ADDLRQMFLA MTDEVRVIIV KLADRLHNMR TLCHMPPHKQ SSIAGETLQV
301 FAPLAKLLGM YSIKSELENL SFMYVSAEDY DRVTSRIANL YKEHEKELTE ANRILVKKIE
361 DDQFLDLVTV NTDVRSVCKE TYSIYKAALK SKGSINDYNQ IAQLRIVVKP KPSVGVGPLC
421 SPQQICYHVL GLVHEIWKPI PRTVKDYIAT PKPNGYQSLH TTVIPFLYES MFRLEVQIRT
481 EEMDLIAERG IAVYYNGKSL STGLVGNAVP LGRNSRGKTG CLNNADFALR VGWLNAIREW
541 QEEFVGNMSS REFVDTITRD LLGSRVFVFT PKGEIKNLPK GATVVDYAYL IHTEIGNKMV
601 AAKVNGNLVS PTHVLENAEV VEIVTYNALS SKSAFQRHKQ WLQHAKTRSA RHKIMRFLRE
661 QAAQCAAEIT QDQVNDFVAD SDSDVEDLTE DSRKSLQWWE KILVNVKQFQ SQDKSRDTTP
721 APQNGSVWAP KVNGKHNKAI KNSSSDEPEF LLPGDGIARI LPANIPAYKE VLPGLDSWRD
781 SKIATWHHLE GQSIEWLCVV SMDRKGMGIF VLFSHD
//