LOCUS AEE82119.1 1324 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana MUTS homolog 6 protein.
ACCESSION CP002687-431
PROTEIN_ID AEE82119.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="MSH6"
/locus_tag="AT4G02070"
/gene_synonym="ARABIDOPSIS THALIANA MUTS HOMOLOG 6"
/gene_synonym="ATMSH6"
/gene_synonym="MSH6-1"
/gene_synonym="MUTS HOMOLOG 6-1"
/gene_synonym="MUTS homolog 6"
/gene_synonym="MUTS HOMOLOG 6-1"
/gene_synonym="T10M13.8"
/gene_synonym="T10M13_8"
/inference="Similar to RNA sequence, EST:INSD:ES001339.1"
/note="MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA
binding; INVOLVED IN: mismatch repair; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA
mismatch repair protein Msh6 (InterPro:IPR017261), DNA
mismatch repair protein MutS, clamp (InterPro:IPR007861),
DNA mismatch repair protein MutS, connector
(InterPro:IPR007860), DNA mismatch repair protein MutS,
core (InterPro:IPR007696), DNA mismatch repair protein
MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch
repair protein MutS, N-terminal (InterPro:IPR016151), DNA
mismatch repair protein MutS, C-terminal
(InterPro:IPR000432), DNA mismatch repair protein
MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain
(InterPro:IPR002999); BEST Arabidopsis thaliana protein
match is: homolog of DNA mismatch repair protein MSH3
(TAIR:AT4G25540.1); Has 29702 Blast hits to 21889 proteins
in 2967 species: Archae - 234; Bacteria - 11721; Metazoa -
3243; Fungi - 2118; Plants - 3658; Viruses - 802; Other
Eukaryotes - 7926 (source: NCBI BLink)."
/db_xref="TAIR:AT4G02070"
/db_xref="Araport:AT4G02070"
intron_pos 316:1 (1/20)
intron_pos 349:2 (2/20)
intron_pos 384:0 (3/20)
intron_pos 402:0 (4/20)
intron_pos 427:0 (5/20)
intron_pos 450:0 (6/20)
intron_pos 478:0 (7/20)
intron_pos 543:0 (8/20)
intron_pos 719:2 (9/20)
intron_pos 763:0 (10/20)
intron_pos 793:2 (11/20)
intron_pos 853:1 (12/20)
intron_pos 921:0 (13/20)
intron_pos 955:0 (14/20)
intron_pos 1009:1 (15/20)
intron_pos 1105:0 (16/20)
intron_pos 1151:0 (17/20)
intron_pos 1177:2 (18/20)
intron_pos 1211:0 (19/20)
intron_pos 1254:1 (20/20)
BEGIN
1 MAPSRRQISG RSPLVNQQRQ ITSFFGKSAS SSSSPSPSPS PSLSNKKTPK SNNPNPKSPS
61 PSPSPPKKTP KLNPNPSSNL PARSPSPGPD TPSPVQSKFK KPLLVIGQTP SPPQSVVITY
121 GDEVVGKQVR VYWPLDKKWY DGSVTFYDKG EGKHVVEYED GEEESLDLGK EKTEWVVGEK
181 SGDRFNRLKR GASALRKVVT DSDDDVEMGN VEEDKSDGDD SSDEDWGKNV GKEVCESEED
241 DVELVDENEM DEEELVEEKD EETSKVNRVS KTDSRKRKTS EVTKSGGEKK SKTDTGTILK
301 GFKASVVEPA KKIGQADRVV KGLEDNVLDG DALARFGARD SEKFRFLGVD RRDAKRRRPT
361 DENYDPRTLY LPPDFVKKLT GGQRQWWEFK AKHMDKVVFF KMGKFYELFE MDAHVGAKEL
421 DIQYMKGEQP HCGFPEKNFS VNIEKLVRKG YRVLVVEQTE TPDQLEQRRK ETGSKDKVVK
481 REVCAVVTKG TLTDGEMLLT NPDASYLMAL TEGGESLTNP TAEHNFGVCL VDVATQKIIL
541 GQFKDDQDCS ALSCLLSEMR PVEIIKPAKV LSYATERTIV RQTRNPLVNN LVPLSEFWDS
601 EKTIYEVGII YKRINCQPSS AYSSEGKILG DGSSFLPKML SELATEDKNG SLALSALGGA
661 IYYLRQAFLD ESLLRFAKFE SLPYCDFSNV NEKQHMVLDA AALENLEIFE NSRNGGYSGT
721 LYAQLNQCIT ASGKRLLKTW LARPLYNTEL IKERQDAVAI LRGENLPYSL EFRKSLSRLP
781 DMERLIARMF SSIEASGRNG DKVVLYEDTA KKQVQEFIST LRGCETMAEA CSSLRAILKH
841 DTSRRLLHLL TPGQSLPNIS SSIKYFKDAF DWVEAHNSGR VIPHEGADEE YDCACKTVEE
901 FESSLKKHLK EQRKLLGDAS INYVTVGKDE YLLEVPESLS GSVPHDYELC SSKKGVSRYW
961 TPTIKKLLKE LSQAKSEKES ALKSISQRLI GRFCEHQEKW RQLVSATAEL DVLISLAFAS
1021 DSYEGVRCRP VISGSTSDGV PHLSATGLGH PVLRGDSLGR GSFVPNNVKI GGAEKASFIL
1081 LTGPNMGGKS TLLRQVCLAV ILAQIGADVP AETFEVSPVD KICVRMGAKD HIMAGQSTFL
1141 TELSETAVML TSATRNSLVV LDELGRGTAT SDGQAIAESV LEHFIEKVQC RGFFSTHYHR
1201 LSVDYQTNPK VSLCHMACQI GEGIGGVEEV TFLYRLTPGA CPKSYGVNVA RLAGLPDYVL
1261 QRAVIKSQEF EALYGKNHRK TDHKLAAMIK QIISSVASDS DYSASKDSLC ELHSMANTFL
1321 RLTN
//