LOCUS AEE82075.1 361 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana rhamnogalacturonan xylosyltransferase
1 protein.
ACCESSION CP002687-363
PROTEIN_ID AEE82075.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RGXT1"
/locus_tag="AT4G01770"
/gene_synonym="rhamnogalacturonan xylosyltransferase 1"
/gene_synonym="T15B16.8"
/gene_synonym="T15B16_8"
/inference="Similar to RNA sequence,
EST:INSD:EG426798.1,INSD:EG420052.1,INSD:EG426967.1,
INSD:EG420001.1,INSD:EG420051.1,INSD:EG420068.1,
INSD:EG420416.1,INSD:EG420027.1,INSD:EG420043.1,
INSD:EG431982.1,INSD:EG420666.1,INSD:EG420070.1,
INSD:EG420020.1,INSD:EG420066.1,INSD:EG426968.1,
INSD:EG420029.1,INSD:EG420045.1,INSD:EG420405.1,
INSD:EG420665.1,INSD:EG420054.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY924810.1,INSD:AY630791.1"
/note="rhamnogalacturonan xylosyltransferase 1 (RGXT1);
CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388), Nucleotide-diphospho-sugar
transferase, predicted (InterPro:IPR005069); BEST
Arabidopsis thaliana protein match is: rhamnogalacturonan
xylosyltransferase 2 (TAIR:AT4G01750.1); Has 292 Blast
hits to 289 proteins in 31 species: Archae - 0; Bacteria -
0; Metazoa - 2; Fungi - 0; Plants - 261; Viruses - 0;
Other Eukaryotes - 29 (source: NCBI BLink)."
/db_xref="TAIR:AT4G01770"
/db_xref="Araport:AT4G01770"
intron_pos 164:0 (1/3)
intron_pos 218:0 (2/3)
intron_pos 292:0 (3/3)
BEGIN
1 MEQKQHILKQ STFSSSPSSY SSISDRPISL LSRNGLLLLL LALVLLLGVL LPWPGSPLFL
61 FPNRLSSSLS PSPQSKWRDY TLAQAARFVA KNGTVIVCAV SSPFLPFLNN WLISVSRQKH
121 QDKVLVIAED YITLYKVNEK WPGHAVLIPP ALDSKTAFSF GSQGFFNFTA RRPQHLLQIL
181 ELGYNVMYND VDMVWLQDPF LYLEGSHDAY FTDDMPQIKP LNHSHDLPHP DRNGETYICS
241 CMIYLRPTNG AKLLMKKWSE ELQSQAWSES IRFKANDQPA FNLALNKTAH QVDLYLLSQV
301 AFPTGGLYFK NEAWVQETKG KHVIVHNNYI IGYDRKMKRF QDYGLWLVDD HALESPLGKL
361 E
//