LOCUS AEE82042.1 343 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal RNA processing Brix domain
protein protein.
ACCESSION CP002687-328
PROTEIN_ID AEE82042.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="MEE49"
/locus_tag="AT4G01560"
/gene_synonym="F11O4.6"
/gene_synonym="F11O4_6"
/gene_synonym="maternal effect embryo arrest 49"
/inference="Similar to RNA sequence,
EST:INSD:AV823320.1,INSD:BP856155.1,INSD:AV522099.1,
INSD:EH835492.1,INSD:EH980798.1,INSD:BP657406.1,
INSD:DR230781.1,INSD:BP635777.1,INSD:DR230777.1,
INSD:EL291727.1,INSD:DR230776.1,INSD:F14088.1,
INSD:AV784263.1,INSD:EH803138.1,INSD:ES080660.1,
INSD:ES154481.1,INSD:DR230780.1,INSD:DR230779.1,
INSD:BP636408.1,INSD:ES195727.1,INSD:EH822473.1,
INSD:AV815873.1,INSD:EH965812.1,INSD:ES188480.1,
INSD:ES165422.1,INSD:ES170183.1,INSD:AA395450.1,
INSD:EG468141.1,INSD:BP626842.1,INSD:BP611744.1,
INSD:DR230778.1,INSD:ES164423.1,INSD:ES125567.1,
INSD:ES070202.1,INSD:ES181087.1,INSD:AV559087.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX826612.1,INSD:AY086463.1,INSD:AY050341.1,
INSD:BT020609.1"
/note="maternal effect embryo arrest 49 (MEE49); CONTAINS
InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST
Arabidopsis thaliana protein match is: Ribosomal RNA
processing Brix domain protein (TAIR:AT1G63780.1); Has 893
Blast hits to 882 proteins in 227 species: Archae - 2;
Bacteria - 0; Metazoa - 265; Fungi - 337; Plants - 121;
Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink)."
/db_xref="TAIR:AT4G01560"
/db_xref="Araport:AT4G01560"
intron_pos 81:0 (1/10)
intron_pos 108:0 (2/10)
intron_pos 140:0 (3/10)
intron_pos 168:0 (4/10)
intron_pos 191:1 (5/10)
intron_pos 219:0 (6/10)
intron_pos 245:2 (7/10)
intron_pos 278:2 (8/10)
intron_pos 302:0 (9/10)
intron_pos 332:0 (10/10)
BEGIN
1 MGFKRKKDDG DGEEMESDVR GKSTFSGGEK RNVILPSMIK NKDKRSKVYA KQKHEKKLEK
61 QKKIRARDAA EKRALELGEE PPQKMIPKTI ENTRESDETV CRPDDEELFA DIDADEFNPV
121 LRREIAPKVL LTTCRFNSTR GPALISELLS VIPNSHYQKR GTYDLKKIVE YATKKDFTSL
181 IVVHTNRREP DALLIIGLPN GPTAHFKLSN LVLRKDIKNH GNPTSHQPEL VLNNFTTRLG
241 NRVGRFFQSL FPPDPNFRGR RVVTFHNQRD FIFFRHHRYI FETKESKSDK GKEETIKPRL
301 QECGPRFTLK LVTLQHGTFD TKGGEFEWVH KPEMDTSRRR FFL
//