LOCUS AEE82007.1 262 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal L5P family protein protein.
ACCESSION CP002687-271
PROTEIN_ID AEE82007.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G01310"
/gene_synonym="F2N1.5"
/gene_synonym="F2N1_5"
/inference="Similar to RNA sequence,
EST:INSD:DR205085.1,INSD:EL060163.1,INSD:BP596848.1,
INSD:DR205077.1,INSD:EL978205.1,INSD:EH965482.1,
INSD:EL153494.1,INSD:EL218885.1,INSD:BP849912.1,
INSD:EL995644.1,INSD:EG495535.1,INSD:DR205080.1,
INSD:DR205094.1,INSD:BP782306.1,INSD:EL004409.1,
INSD:EL987358.1,INSD:BP660127.1,INSD:BP625021.1,
INSD:DR205081.1,INSD:EL147836.1,INSD:BP858684.1,
INSD:ES074623.1,INSD:DR205084.1,INSD:DR205090.1,
INSD:EL037882.1,INSD:EL214706.1,INSD:EL265480.1,
INSD:EH867352.1,INSD:EH898200.1,INSD:BP587772.1,
INSD:AJ609329.1,INSD:DR205093.1,INSD:BP819025.1,
INSD:EL178313.1,INSD:EH907800.1,INSD:EL046766.1,
INSD:EL302595.1,INSD:BP860329.1,INSD:EH928980.1,
INSD:EL165891.1,INSD:EL231525.1,INSD:AV793114.1,
INSD:DR205071.1,INSD:BP842986.1,INSD:EH952217.1,
INSD:EL157810.1,INSD:ES145679.1,INSD:EL302891.1,
INSD:DR373606.1,INSD:EL029856.1,INSD:BP821836.1,
INSD:DR205082.1,INSD:BP836810.1,INSD:EL116180.1,
INSD:EL034506.1,INSD:EG495536.1,INSD:EL175936.1,
INSD:EL171333.1,INSD:CB263190.1,INSD:EL133547.1,
INSD:EL971988.1,INSD:EL228514.1,INSD:DR205083.1,
INSD:AA395708.1,INSD:BP817140.1,INSD:ES101141.1,
INSD:EL281965.1,INSD:EH849195.1,INSD:EH952882.1,
INSD:ES114715.1,INSD:EH795833.1,INSD:EL123390.1,
INSD:BP645819.1,INSD:DR205075.1,INSD:BP842214.1,
INSD:EL176196.1,INSD:CK119112.1,INSD:EL141282.1,
INSD:BP851757.1,INSD:AA042113.1,INSD:DR205087.1,
INSD:DR205073.1,INSD:EH826234.1,INSD:DR205089.1,
INSD:DR205096.1,INSD:ES003229.1,INSD:CO048551.1,
INSD:CO048550.1,INSD:EL155690.1,INSD:BP640532.1,
INSD:BP856654.1,INSD:BP588241.1,INSD:BP859296.1,
INSD:EH861023.1,INSD:AV441243.1,INSD:EH937336.1,
INSD:EL221147.1,INSD:EL968155.1,INSD:BP842716.1,
INSD:EL170289.1,INSD:BP649477.1,INSD:BP638479.1,
INSD:ES073201.1,INSD:EL072233.1,INSD:AV783341.1,
INSD:AV520518.1,INSD:EL083829.1,INSD:DR205079.1,
INSD:AI998893.1,INSD:EL055136.1,INSD:DR205099.1,
INSD:ES044592.1,INSD:EL991670.1,INSD:EL326339.1,
INSD:EL285466.1,INSD:BP818999.1,INSD:ES135058.1,
INSD:EH933818.1,INSD:EL314127.1,INSD:EH853168.1,
INSD:EH862501.1,INSD:T22615.1,INSD:BP590909.1,
INSD:EL257937.1,INSD:BP860747.1,INSD:EL026595.1,
INSD:AV532012.1,INSD:EG487010.1,INSD:EH807884.1,
INSD:EH821131.1,INSD:EL267208.1,INSD:DR205072.1,
INSD:EL218380.1,INSD:ES137450.1,INSD:EL146549.1,
INSD:EH860751.1,INSD:EL129199.1,INSD:DR205097.1,
INSD:ES110094.1,INSD:EG487008.1,INSD:DR205098.1,
INSD:AV822544.1,INSD:BP664696.1,INSD:BP641247.1,
INSD:EH980506.1,INSD:EL156722.1,INSD:BP634674.1,
INSD:EL146909.1,INSD:H36398.1,INSD:EL988024.1,
INSD:BP645553.1,INSD:BE038425.1,INSD:DR205078.1,
INSD:EL999345.1,INSD:BE038229.1,INSD:EL123508.1,
INSD:EL163241.1,INSD:BP834032.1,INSD:BP812242.1,
INSD:BP842961.2,INSD:DR205074.1,INSD:EL129729.1,
INSD:BP839643.1,INSD:BP561622.1,INSD:EL209994.1,
INSD:DR205095.1,INSD:BP617657.1,INSD:AV442275.1,
INSD:BP821163.1,INSD:EH854470.1,INSD:EL109967.1,
INSD:DR205092.1,INSD:EH859672.1,INSD:EL969468.1,
INSD:BP828376.1,INSD:EH951927.1,INSD:EH920281.1,
INSD:BP866434.1,INSD:EH956750.1,INSD:DR205076.1,
INSD:EH983541.1,INSD:BP813942.1,INSD:BP829600.1,
INSD:EH946625.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827014.1,INSD:AY114008.1,INSD:BX826973.1,
INSD:AY056194.1,INSD:AY086243.1"
/note="Ribosomal L5P family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: in 6 components; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Ribosomal protein L5
(InterPro:IPR002132), Ribosomal protein L5, conserved site
(InterPro:IPR020929), Ribosomal protein L5, C-terminal
(InterPro:IPR020928), Ribosomal protein L5, N-terminal
(InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins
in 3016 species: Archae - 312; Bacteria - 5408; Metazoa -
222; Fungi - 280; Plants - 343; Viruses - 0; Other
Eukaryotes - 2654 (source: NCBI BLink)."
/db_xref="TAIR:AT4G01310"
/db_xref="Araport:AT4G01310"
intron_pos 83:0 (1/3)
intron_pos 150:0 (2/3)
intron_pos 197:2 (3/3)
BEGIN
1 MASPSLLQSS ASSFHGRFSP LAAPSSARML SPPLRNVVKV SASGTVLVEK SEAEKTQRLK
61 TAYLERIIPA LKEEFKYVNI HQVPKVQKIV VNCGIGDAAQ NDKGLEAAMK DIALITGQKP
121 IKTRARASIA TFKIREDQPL GIAVTLRGDV MYSFLDRLIN LALPRTRDFQ GVSPSSFDGN
181 GNYSIGVKDQ GVFPEIRFDA VGKTRGMDVC ISTTAKSDQE GQKLLALMGM PFREGGGGST
241 GAIVRKKKLK SHHFDAKGKG KR
//