LOCUS AEE81971.1 528 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin carboxyl-terminal hydrolase
family protein protein.
ACCESSION CP002687-226
PROTEIN_ID AEE81971.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="WTF1"
/locus_tag="AT4G01037"
/gene_synonym="AtWTF1"
/gene_synonym="what's this factor?"
/inference="Similar to RNA sequence,
EST:INSD:DR355607.1,INSD:ES107350.1,INSD:CO048609.1,
INSD:CO048612.1,INSD:EG453289.1,INSD:CO048604.1,
INSD:CO048620.1,INSD:EH825952.1,INSD:EH934904.1,
INSD:EH806697.1,INSD:EG453288.1,INSD:EG453299.1,
INSD:EG453298.1,INSD:EL050439.1,INSD:EH817180.1,
INSD:CO048617.1,INSD:EL255036.1,INSD:EG453305.1,
INSD:CO048598.1,INSD:EL277313.1,INSD:EL298577.1,
INSD:EL987246.1,INSD:EH838307.1,INSD:EG453303.1,
INSD:EG440965.1,INSD:EG456833.1,INSD:EG453302.1,
INSD:ES123556.1,INSD:EL184734.1,INSD:EG449808.1,
INSD:EG453304.1,INSD:EG456836.1,INSD:EH948255.1,
INSD:EG456829.1,INSD:EG456831.1,INSD:EL255265.1,
INSD:EH932780.1,INSD:EL279269.1,INSD:EL103143.1,
INSD:EG527332.1,INSD:EL130128.1,INSD:CO048608.1,
INSD:EG484004.1,INSD:EG456835.1,INSD:EG456834.1,
INSD:EG453300.1,INSD:CB263374.1,INSD:EG453290.1,
INSD:EG453287.1,INSD:EL057783.1,INSD:CB262870.1,
INSD:EG527334.1,INSD:EG456832.1,INSD:ES009528.1,
INSD:EG453301.1,INSD:EH879489.1,INSD:EL143071.1"
/inference="Similar to RNA sequence, mRNA:INSD:EF183029.1"
/note="what's this factor? (WTF1); CONTAINS InterPro
DOMAIN/s: RNA recognition domain, plant
(InterPro:IPR021099); BEST Arabidopsis thaliana protein
match is: Ubiquitin carboxyl-terminal hydrolase family
protein (TAIR:AT5G62990.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G01037"
/db_xref="Araport:AT4G01037"
BEGIN
1 MEPKLLLSAH KPLFVSCNSP FNEKTKLSVK SGLPMSTIRA ARSQFMGEGL ILGNKYGFWS
61 TSRKTRVVVE PVRAAVKRRK ELTFDSVVQR DKKLKLVLNI RKILVSQPDR MMSLRGLGKY
121 RRDLGLKKRR RFIALLRKYP GVFEIVEEGA YSLRFKMTSE AERLYLDEMR IRNELEDVLV
181 VKLRKLVMMS IDKRILLEKI SHLKTDLGLP LEFRDTICQR YPQYFRVVPT PRGPALELTH
241 WDPELAVSAA ELSEDDNRTR ESEERNLIID RPPKFNRVKL PRGLNLSKSE TRKISQFRDM
301 QYISPYKDFS HLRSGTLEKE KHACGVIHEL LSLTTEKRTL VDHLTHFREE FRFSQQLRGM
361 LIRHPDLFYV SLKGERDSVF LREAYRNSEL IDKDPLTLVK EKMRALVSVP RFPRRGGPRK
421 DEEGREVEID GSDADGEEEE EESDAEEWSD VDGYLEGEDG GNDDDGDWTD DEGEEDVPPN
481 FDDDDEDEEE DSVKIGLSPS SRKSSSPRKK EEKVLTPVFP DGTPREKW
//