LOCUS AEE81970.1 768 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pentatricopeptide (PPR) repeat-containing
protein protein.
ACCESSION CP002687-225
PROTEIN_ID AEE81970.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G01030"
/gene_synonym="F3I3.50"
/gene_synonym="F3I3_50"
/inference="Similar to RNA sequence,
EST:INSD:AV783719.1,INSD:AV442568.1,INSD:BX838238.1,
INSD:BP669868.1,INSD:EG499189.1,INSD:EH960268.1,
INSD:EL207621.1,INSD:BP588050.1,INSD:BP608002.1,
INSD:EL323432.1,INSD:DR343796.1,INSD:AV536388.1,
INSD:BP670067.1,INSD:BP663082.1,INSD:EL018536.1,
INSD:BX838694.1,INSD:EL025818.1,INSD:BP628997.1,
INSD:EL078551.1,INSD:EH891990.1,INSD:EH905128.1,
INSD:BP650583.1,INSD:BP669641.1,INSD:EL161309.1,
INSD:DR375679.1,INSD:EG499199.1,INSD:EL075415.1,
INSD:AV558225.1,INSD:AV803976.1,INSD:EL293136.1,
INSD:EH872267.1,INSD:BP641588.1,INSD:EL198425.1,
INSD:EH918643.1,INSD:AI992491.1,INSD:EL117812.1,
INSD:AV441188.1,INSD:BP662919.1,INSD:AV822858.1,
INSD:AV563181.1,INSD:AA041127.1,INSD:AV537204.1,
INSD:BP626869.1,INSD:BP661316.1,INSD:EH845715.1"
/note="pentatricopeptide (PPR) repeat-containing protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT1G20230.1); Has 44944 Blast hits to 14972
proteins in 296 species: Archae - 1; Bacteria - 32;
Metazoa - 191; Fungi - 174; Plants - 43677; Viruses - 0;
Other Eukaryotes - 869 (source: NCBI BLink)."
/db_xref="TAIR:AT4G01030"
/db_xref="Araport:AT4G01030"
BEGIN
1 MYRFLGLTIH GGLIKRGLDN SDTRVVSASM GFYGRCVSLG FANKLFDEMP KRDDLAWNEI
61 VMVNLRSGNW EKAVELFREM QFSGAKAYDS TMVKLLQVCS NKEGFAEGRQ IHGYVLRLGL
121 ESNVSMCNSL IVMYSRNGKL ELSRKVFNSM KDRNLSSWNS ILSSYTKLGY VDDAIGLLDE
181 MEICGLKPDI VTWNSLLSGY ASKGLSKDAI AVLKRMQIAG LKPSTSSISS LLQAVAEPGH
241 LKLGKAIHGY ILRNQLWYDV YVETTLIDMY IKTGYLPYAR MVFDMMDAKN IVAWNSLVSG
301 LSYACLLKDA EALMIRMEKE GIKPDAITWN SLASGYATLG KPEKALDVIG KMKEKGVAPN
361 VVSWTAIFSG CSKNGNFRNA LKVFIKMQEE GVGPNAATMS TLLKILGCLS LLHSGKEVHG
421 FCLRKNLICD AYVATALVDM YGKSGDLQSA IEIFWGIKNK SLASWNCMLM GYAMFGRGEE
481 GIAAFSVMLE AGMEPDAITF TSVLSVCKNS GLVQEGWKYF DLMRSRYGII PTIEHCSCMV
541 DLLGRSGYLD EAWDFIQTMS LKPDATIWGA FLSSCKIHRD LELAEIAWKR LQVLEPHNSA
601 NYMMMINLYS NLNRWEDVER IRNLMRNNRV RVQDLWSWIQ IDQTVHIFYA EGKTHPDEGD
661 IYFELYKLVS EMKKSGYVPD TSCIHQDISD SEKEKLLMGH TEKLAMTYGL IKKKGLAPIR
721 VVKNTNICSD SHTVAKYMSV LRNREIVLQE GARVHHFRDG KCSCNDSW
//