LOCUS AEE81964.1 840 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transcription factor jumonji (jmjC)
domain-containing protein protein.
ACCESSION CP002687-213
PROTEIN_ID AEE81964.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G00990"
/inference="Similar to RNA sequence,
EST:INSD:EL170592.1,INSD:ES177063.1,INSD:EL253350.1,
INSD:EL012218.1,INSD:AV533699.1,INSD:ES193809.1,
INSD:EH958633.1,INSD:ES165662.1,INSD:AV830001.1,
INSD:ES197347.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY072204.1,INSD:AY096708.1"
/note="Transcription factor jumonji (jmjC)
domain-containing protein; FUNCTIONS IN: sequence-specific
DNA binding transcription factor activity, zinc ion
binding; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription factor jumonji/aspartyl beta-hydroxylase
(InterPro:IPR003347), Zinc finger, RING-type
(InterPro:IPR001841), Transcription factor jumonji
(InterPro:IPR013129); BEST Arabidopsis thaliana protein
match is: Transcription factor jumonji (jmjC)
domain-containing protein (TAIR:AT1G11950.1); Has 966
Blast hits to 671 proteins in 113 species: Archae - 0;
Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301;
Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink)."
/db_xref="TAIR:AT4G00990"
/db_xref="Araport:AT4G00990"
intron_pos 66:0 (1/12)
intron_pos 111:2 (2/12)
intron_pos 145:0 (3/12)
intron_pos 188:1 (4/12)
intron_pos 209:2 (5/12)
intron_pos 443:0 (6/12)
intron_pos 553:0 (7/12)
intron_pos 644:1 (8/12)
intron_pos 720:0 (9/12)
intron_pos 744:1 (10/12)
intron_pos 773:0 (11/12)
intron_pos 813:0 (12/12)
BEGIN
1 MEKMRGKRIR PRDSGELVED GRSESERKTR KKENDVVSKG RIGRGRGRGE VSKRSIEIDI
61 SNPEKDIKPD GSRKCLGSTC HHCKILTSES DLIFCSKCNK KCYCFDCIKR SYSERTHEEV
121 RAACPFCMMT CICRACLRLP LVIKPPSEKD TDVKLKQLQY LLVKVLPVLK DIYTEQNREL
181 EIESTIRGHP VTEANIKRCK LDPSERIYCD LCRTSIANFH RSCPNKNCSV DICLSCCKEL
241 SEGFHQERDG KKNAEGKGYE CRIPAGQGKD SDAYVPLHFS TWKLNSDSSI PCPPKECGGC
301 GTSTLELRRL WKRDWVEKLI TNAEKCTLNF RPTDVDIVHE CSSCSTNSDS IRRQAAFRKN
361 AHDNFLYSPN AVDLAEDDIA HFQFHWMKAE PVIVRNVLEK TSGLSWEPMV MWRACREMDP
421 KRKGTEEETT KVKALDCLDW CEVEINLHQF FEGYLEGRMH KNGWPEMLKL KDWPPSDLFE
481 KRLPRHNAEF IAALPFFDYT DPKSGILNLA TRFPEGSLKP DLGPKTYIAY GFHEELNRGD
541 SVTKLHCDIS DAVNVLTHTA KVEIPPVKYQ NIKVHQKKYA EAMLQKQQYS GQVKEASELE
601 NKSMKEVDES KKDLKDKAAN EEQSNNSSRP SGSGEAEKVI ISKEDNPTQP AVSTSVESIQ
661 EQKLDAPKET DGNTNERSKA VHGGAVWDIF RREDVPKLIQ FLKRHEHEFR HFNNEPLESV
721 IHPIHDQTMF LSDSQKKQLK EEFDIEPWTF EQHLGEAVFI PAGCPHQVRN RQSCIKVALD
781 FVAPESVEEC LRLTQEFRRL PKDHSSSEDK LELKKIALYA ASSAIREVKG LMQSSRRSDT
//