LOCUS AEE81944.1 291 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DHHC-type zinc finger family protein protein.
ACCESSION CP002687-175
PROTEIN_ID AEE81944.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G00840"
/gene_synonym="A_TM018A10.8"
/gene_synonym="A_TM018A10_8"
/gene_synonym="T18A10.14"
/gene_synonym="T18A10_14"
/inference="Similar to RNA sequence,
EST:INSD:EL289853.1,INSD:EH853560.1,INSD:AV538227.1,
INSD:EH873348.1,INSD:EL082912.1,INSD:BP609217.1,
INSD:DR256753.1,INSD:AV442237.1,INSD:ES010344.1,
INSD:ES005299.1,INSD:EL128918.1,INSD:EL988044.1,
INSD:ES081107.1,INSD:AU237782.1,INSD:Z17978.1,
INSD:AV441356.1,INSD:EL975071.1,INSD:DR256754.1,
INSD:ES140376.1,INSD:DR256755.1,INSD:EG473786.1,
INSD:DR256751.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT020511.1,INSD:BX828745.1,INSD:AK229293.1,
INSD:BT020391.1"
/note="DHHC-type zinc finger family protein; FUNCTIONS IN:
zinc ion binding; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: male
gametophyte, pollen tube; EXPRESSED DURING: L mature
pollen stage, M germinated pollen stage; CONTAINS InterPro
DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594);
BEST Arabidopsis thaliana protein match is: DHHC-type zinc
finger family protein (TAIR:AT3G60800.1); Has 5117 Blast
hits to 5115 proteins in 251 species: Archae - 0; Bacteria
- 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses -
0; Other Eukaryotes - 1332 (source: NCBI BLink)."
/db_xref="TAIR:AT4G00840"
/db_xref="Araport:AT4G00840"
intron_pos 64:0 (1/6)
intron_pos 130:1 (2/6)
intron_pos 161:0 (3/6)
intron_pos 203:1 (4/6)
intron_pos 232:0 (5/6)
intron_pos 254:0 (6/6)
BEGIN
1 MNLFRFCSGL KVLGYFMILL VVAVVGVSYY AVVVSTWWPI LIRGDHGALS ALAALIIFVF
61 HFLLIMLLWS YFTTVFTDPG SVPEHFRREM GGGDSLEAGT STDQGAFGSL GYCTKCRNVK
121 PPRCHHCSVC QRCVLKMDHH CVWIVNCVGA RNYKFFLLFL FYTFLETMLD VIVLLPSFIE
181 FFSQAIKHSS SPGKLASLVL AFVLNFAFVL SLLCFVVMHI SLLSSNTTSV EVHEKNGEVR
241 WKYDLGKKKN FEQVFGKKKA FWLLPLYSKD DIDNITSLEG LEFPTCSDID P
//