LOCUS AEE81938.1 113 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 60S acidic ribosomal protein family protein.
ACCESSION CP002687-167
PROTEIN_ID AEE81938.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G00810"
/gene_synonym="A_TM018A10.9"
/gene_synonym="A_TM018A10_9"
/gene_synonym="T18A10.8"
/gene_synonym="T18A10_8"
/inference="Similar to RNA sequence,
EST:INSD:DR332456.1,INSD:DR332413.1,INSD:BP819264.1,
INSD:DR332432.1,INSD:DR332426.1,INSD:EH951224.1,
INSD:EL123905.1,INSD:EL289584.1,INSD:BP654111.1,
INSD:DR332438.1,INSD:EL152215.1,INSD:EL982643.1,
INSD:DR332416.1,INSD:ES079751.1,INSD:DR332425.1,
INSD:DR332440.1,INSD:BP637763.1,INSD:EL002699.1,
INSD:BP649786.1,INSD:ES038161.1,INSD:ES202918.1,
INSD:AV787661.1,INSD:DR332428.1,INSD:AV522332.1,
INSD:EH808334.1,INSD:EH916352.1,INSD:BP840399.1,
INSD:DR332441.1,INSD:BP797530.1,INSD:BP822939.1,
INSD:ES073730.1,INSD:BP619526.1,INSD:DR332406.1,
INSD:EL077109.1,INSD:CK118948.1,INSD:DR332417.1,
INSD:ES009177.1,INSD:BP630041.1,INSD:EL056866.1,
INSD:BP862553.1,INSD:BP651912.1,INSD:EL981729.1,
INSD:DR332439.1,INSD:EL030029.1,INSD:EL109532.1,
INSD:DR332446.1,INSD:AV534095.1,INSD:ES006086.1,
INSD:ES194815.1,INSD:EL286312.1,INSD:ES132030.1,
INSD:DR332397.1,INSD:BP653503.1,INSD:DR332431.1,
INSD:EH852574.1,INSD:DR332437.1,INSD:EL052578.1,
INSD:BP797271.1,INSD:BP643145.1,INSD:ES152339.1,
INSD:BP583745.1,INSD:DR332415.1,INSD:ES149884.1,
INSD:EH934583.1,INSD:EH828305.1,INSD:ES158470.1,
INSD:BP800780.2,INSD:DR375751.1,INSD:EL277672.1,
INSD:BP815522.1,INSD:BP648139.1,INSD:BP636772.1,
INSD:BP817540.1,INSD:DR332398.1,INSD:ES009414.1,
INSD:ES168607.1,INSD:BP640751.1,INSD:DR332399.1,
INSD:BP599673.1,INSD:EH974719.1,INSD:EL044639.1,
INSD:DR332423.1,INSD:BP606615.1,INSD:DR332418.1,
INSD:BP828960.1,INSD:BP580835.1,INSD:BP651080.1,
INSD:BP835163.2,INSD:DR332459.1,INSD:ES146006.1,
INSD:ES205814.1,INSD:AV533575.1,INSD:BP837474.2,
INSD:EG420487.1,INSD:BP841801.1,INSD:DR332443.1,
INSD:EL226857.1,INSD:DR332448.1,INSD:EL213574.1,
INSD:BP631532.1,INSD:DR332445.1,INSD:BP602403.1,
INSD:BP644558.1,INSD:AV787514.1,INSD:BP642135.1,
INSD:ES159220.1,INSD:AV820221.1,INSD:BP839457.1,
INSD:ES211984.1,INSD:DR332453.1,INSD:BP827082.1,
INSD:EL059183.1,INSD:BP591111.1,INSD:DR332407.1,
INSD:DR332395.1,INSD:BP582511.1,INSD:DR332393.1,
INSD:DR332411.1,INSD:BP847119.1,INSD:EH942019.1,
INSD:DR332408.1,INSD:AV820583.1,INSD:BP649623.1,
INSD:DR332422.1,INSD:DR332450.1,INSD:EL305603.1,
INSD:BE662857.1,INSD:EL156366.1,INSD:EL304328.1,
INSD:DR332419.1,INSD:EL313131.1,INSD:EL140417.1,
INSD:AV788767.1,INSD:BP642528.1,INSD:DR332405.1,
INSD:ES184700.1,INSD:DR332424.1,INSD:DR332394.1,
INSD:BP628121.1,INSD:BP634140.1,INSD:EH804371.1,
INSD:ES000768.1,INSD:EL317298.1,INSD:EH942706.1,
INSD:ES178984.1,INSD:EL175592.1,INSD:DR332434.1,
INSD:EH857046.1,INSD:EH834735.1,INSD:EL327851.1,
INSD:ES086585.1,INSD:BP590880.1,INSD:BP656141.1,
INSD:EL103574.1,INSD:BP582837.1,INSD:ES104500.1,
INSD:EL202091.1,INSD:BP657674.1,INSD:AV532041.1,
INSD:CF652211.1,INSD:ES175177.1,INSD:DR332409.1,
INSD:AV797560.1,INSD:DR332412.1,INSD:DR332433.1,
INSD:DR332396.1,INSD:BP597404.1,INSD:DR332404.1,
INSD:EL149718.1,INSD:ES184586.1,INSD:BP648905.1,
INSD:DR332451.1,INSD:EL047440.1,INSD:BP814431.1,
INSD:EH904571.1,INSD:DR332455.1,INSD:EL211548.1,
INSD:ES167786.1,INSD:BP671329.1,INSD:ES052951.1,
INSD:ES083842.1,INSD:ES101434.1,INSD:BP560717.1,
INSD:BP821392.1,INSD:EH872870.1,INSD:BP831326.1,
INSD:DR332403.1,INSD:DR332457.1,INSD:ES015297.1,
INSD:EL293924.1,INSD:ES095910.1,INSD:BP637686.1,
INSD:EL319799.1,INSD:ES060621.1,INSD:EL140466.1,
INSD:EH907140.1,INSD:BP638557.1,INSD:EH966149.1,
INSD:DR332430.1,INSD:ES094285.1,INSD:DR332447.1,
INSD:BP656309.1,INSD:EH825486.1,INSD:DR332458.1,
INSD:BP641474.1,INSD:EH981413.1,INSD:EH961213.1,
INSD:BP841375.1,INSD:ES172439.1,INSD:DR374330.1,
INSD:DR332401.1,INSD:EL214903.1,INSD:CD532060.1,
INSD:BP641531.1,INSD:ES072466.1,INSD:BP577926.1,
INSD:EH828225.1,INSD:EL064439.1,INSD:DR332410.1,
INSD:DR332435.1,INSD:EG420475.1,INSD:EH830573.1,
INSD:EL106545.1,INSD:DR332436.1,INSD:ES047820.1,
INSD:EL008513.1,INSD:AV827219.2,INSD:ES206899.1,
INSD:BP650516.1,INSD:EL027798.1,INSD:EH985253.1,
INSD:DR332427.1,INSD:DR332454.1,INSD:AA728671.1,
INSD:BP841437.1,INSD:EH883350.1,INSD:DR332421.1,
INSD:DR332420.1,INSD:ES084480.1,INSD:EH841814.1,
INSD:BP839157.1,INSD:ES159090.1,INSD:ES001726.1,
INSD:BP581274.1,INSD:BP658733.1,INSD:BP823129.1,
INSD:BP826774.1,INSD:BP618264.1,INSD:EL324495.1,
INSD:EL291111.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF361624.1,INSD:AY055096.1"
/note="60S acidic ribosomal protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translational elongation; LOCATED IN: cytosol, cytosolic
ribosome, ribosome, nucleus; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosomal protein 60S
(InterPro:IPR001813); BEST Arabidopsis thaliana protein
match is: 60S acidic ribosomal protein family
(TAIR:AT5G47700.2); Has 2191 Blast hits to 2191 proteins
in 389 species: Archae - 90; Bacteria - 0; Metazoa - 852;
Fungi - 488; Plants - 457; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink)."
/db_xref="TAIR:AT4G00810"
/db_xref="Araport:AT4G00810"
intron_pos 25:0 (1/2)
intron_pos 97:0 (2/2)
BEGIN
1 MSTVGELACS YAVMILEDEG IAITSDKIAT LVKAAGVEIE SYWPMLFAKM AEKRNVTDLI
61 MNVGAGGGGG GAPVSAAAPA AAGGAAAAAP AKEEKKDEPA EESDGDLGFG LFD
//