LOCUS AEE81935.1 299 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRAF-like family protein protein.
ACCESSION CP002687-163
PROTEIN_ID AEE81935.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G00780"
/gene_synonym="A_TM018A10.12"
/gene_synonym="A_TM018A10_12"
/gene_synonym="T18A10.3"
/gene_synonym="T18A10_3"
/inference="Similar to RNA sequence,
EST:INSD:R65502.1,INSD:CD531048.1,INSD:EG525798.1,
INSD:AV829798.1,INSD:DR375951.1,INSD:BP630015.1,
INSD:CB257528.1,INSD:BP855163.1,INSD:DR199164.1,
INSD:T03964.1,INSD:EH864883.1,INSD:N65507.1,
INSD:DR199167.1,INSD:AV814495.1,INSD:CO048774.1,
INSD:EH922654.1,INSD:EL223608.1,INSD:DR199162.1,
INSD:BP784537.1,INSD:AV808685.1,INSD:CD532001.1,
INSD:DR199165.1,INSD:AI992841.1,INSD:BP815743.1,
INSD:EL101485.1,INSD:DR199166.1,INSD:AV522219.1,
INSD:EL006759.1,INSD:BP789981.1,INSD:EG497400.1,
INSD:EH910863.1,INSD:AV441453.1,INSD:EH985457.1,
INSD:BU635258.1,INSD:R30142.1,INSD:CB259344.1,
INSD:CB259760.1,INSD:DR199163.1,INSD:EG525797.1,
INSD:AI100443.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY091337.1,INSD:AY087644.1,INSD:AY065285.1,
INSD:BX828531.1,INSD:BX827245.1,INSD:BX828530.1"
/note="TRAF-like family protein; CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083); BEST Arabidopsis thaliana protein
match is: TRAF-like family protein (TAIR:AT4G01390.1); Has
760 Blast hits to 681 proteins in 32 species: Archae - 0;
Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 739;
Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink)."
/db_xref="TAIR:AT4G00780"
/db_xref="Araport:AT4G00780"
intron_pos 9:1 (1/5)
intron_pos 52:2 (2/5)
intron_pos 101:1 (3/5)
intron_pos 195:2 (4/5)
intron_pos 251:1 (5/5)
BEGIN
1 MSRPIPIEEM VRLFKIRHTT SHLFKIDNFS LLKKHGIEKV ESSVFDLAGH KWKLSVYPNG
61 HKNAKGTHVS MFLVNQVPVN DMPTYELLVV SQLERKWHTH GRDEFDINPE PASEGFLRFI
121 SLADLERKGF LIGDCCMFGV KFHGIEPANP GTAECFSLIE KPLNHKVTWM MSKFSSFNPG
181 KAHQSNEFVV GTRKWRLEVH PRGYMDEKDK SFSVYLSAEG FVNNAPMTKT YAKFKLRVLD
241 QVSWNHVEES GLSWFDAEPS DQSGFADFMP LGKLNEPYLV KDKLYVGVEF EVVSTTYYC
//