LOCUS AEE80497.1 386 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FMN-linked oxidoreductases superfamily
protein protein.
ACCESSION CP002686-9470
PROTEIN_ID AEE80497.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G63510"
/inference="Similar to RNA sequence,
EST:INSD:DR227205.1,INSD:EL251968.1,INSD:ES088244.1,
INSD:DR227207.1,INSD:EL246005.1,INSD:T88477.1,
INSD:EH925835.1,INSD:DR227206.1,INSD:DR379730.1,
INSD:AV542064.1,INSD:ES104795.1,INSD:ES146805.1,
INSD:AV808827.1"
/note="FMN-linked oxidoreductases superfamily protein;
FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD
binding, catalytic activity; INVOLVED IN: regulation of
nitrogen utilization, tRNA processing, oxidation
reduction, metabolic process; EXPRESSED IN: 18 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Aldolase-type TIM barrel
(InterPro:IPR013785), tRNA-dihydrouridine synthase
(InterPro:IPR001269); BEST Arabidopsis thaliana protein
match is: Aldolase-type TIM barrel family protein
(TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins
in 2553 species: Archae - 58; Bacteria - 8007; Metazoa -
234; Fungi - 152; Plants - 146; Viruses - 0; Other
Eukaryotes - 3067 (source: NCBI BLink)."
/db_xref="TAIR:AT3G63510"
/db_xref="Araport:AT3G63510"
intron_pos 31:1 (1/11)
intron_pos 65:0 (2/11)
intron_pos 107:2 (3/11)
intron_pos 131:0 (4/11)
intron_pos 165:1 (5/11)
intron_pos 204:2 (6/11)
intron_pos 232:0 (7/11)
intron_pos 252:2 (8/11)
intron_pos 277:0 (9/11)
intron_pos 305:0 (10/11)
intron_pos 332:0 (11/11)
BEGIN
1 MSLRCSSSPQ CSNPLLDSPP LRLPIFLLPS DNHYRTLARL ITKHAWLYTE MIAAETLVHQ
61 QTNLDRFLAF SPQQHPIVLQ LGGSNVENLA KAAKLSDAYG YDEINLNCGC PSPKVAGHGC
121 FGVSLMLKPK LVGEAMSAIA ANTNVPVTVK CRIGVDNHDS YDELCDFIYK VSTLSPTRHF
181 IVHSRKALLG GISPADNRRI PPLKYEYYYA LVRDFPDLRF TINGGITSVS KVNAALKEGA
241 HGVMVGRAAY NNPWQTLGQV DTAVYGVPSS GLTRRQVLEQ YQVYGDSVLG THGNGRPNVR
301 DLVKPLLNLF HSENGNSLWK RRADAAFKEC RSVGSLLEES LRAIPDCVLD SPISGSPESG
361 DEDVFADVHN VLPPPYEAGE EIILCA
//