LOCUS AEE80493.1 291 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L1p/L10e family protein.
ACCESSION CP002686-9465
PROTEIN_ID AEE80493.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EMB3126"
/locus_tag="AT3G63490"
/gene_synonym="EMBRYO DEFECTIVE 3126"
/gene_synonym="plastid ribosomal protein L1"
/gene_synonym="PRPL1"
/inference="Similar to RNA sequence,
EST:INSD:ES129094.1,INSD:EH888969.1,INSD:DR348912.1,
INSD:BP616246.1,INSD:BP650530.1,INSD:ES098485.1,
INSD:BP654802.1,INSD:BP793879.1,INSD:AV525476.1,
INSD:EL136058.1,INSD:DR348932.1,INSD:DR358282.1,
INSD:ES181083.1,INSD:BP636805.1,INSD:AA404929.1,
INSD:DR348897.1,INSD:DR348891.1,INSD:BE524150.1,
INSD:BE523235.1,INSD:DR348928.1,INSD:BP634676.1,
INSD:CK121438.1,INSD:BP609576.1,INSD:H36021.1,
INSD:ES030930.1,INSD:BP651440.1,INSD:BP866721.1,
INSD:BP826408.1,INSD:CF774189.1,INSD:DR348911.1,
INSD:DR348926.1,INSD:EL174198.1,INSD:BP613153.1,
INSD:EL044939.1,INSD:AV798021.1,INSD:AA712645.1,
INSD:BP615743.1,INSD:BP868974.1,INSD:EL248772.1,
INSD:EL116276.1,INSD:DR348924.1,INSD:DR348933.1,
INSD:EH919213.1,INSD:DR348893.1,INSD:EL272136.1,
INSD:AV817051.1,INSD:EH873449.1,INSD:BP866996.1,
INSD:AV810844.1,INSD:BP855979.1,INSD:DR348878.1,
INSD:DR348888.1,INSD:CB264990.1,INSD:EL042735.1,
INSD:EL130295.1,INSD:AV524070.1,INSD:DR348927.1,
INSD:T13849.1,INSD:BP827612.1,INSD:AV538781.1,
INSD:ES023581.1,INSD:BP612489.1,INSD:EH834324.1,
INSD:DR348915.1,INSD:EL099276.1,INSD:EL307995.1,
INSD:EH959144.1,INSD:CB258670.1,INSD:ES115599.1,
INSD:EH891829.1,INSD:EL018769.1,INSD:Z34943.1,
INSD:EL314947.1,INSD:EL224749.1,INSD:BP606219.1,
INSD:EH884363.1,INSD:DR348900.1,INSD:ES095604.1,
INSD:EL243289.1,INSD:AV806747.1,INSD:DR348898.1,
INSD:ES083902.1,INSD:EL078216.1,INSD:CK119684.1,
INSD:EH899394.1,INSD:BP796273.1,INSD:AV524654.1,
INSD:AV518200.1,INSD:EH925498.1,INSD:BE523804.1,
INSD:AV548837.1,INSD:BP617325.1,INSD:BP848632.2,
INSD:EH949220.1,INSD:ES118681.1,INSD:DR348923.1,
INSD:DR348901.1,INSD:EL106041.1,INSD:BP646855.1,
INSD:AV817490.1,INSD:ES048802.1,INSD:BP599736.1,
INSD:ES200148.1,INSD:BU636629.1,INSD:EH866819.1,
INSD:EL323143.1,INSD:AV810015.1,INSD:AV796967.1,
INSD:AV790591.1,INSD:AV545459.1,INSD:EL217888.1,
INSD:BP652879.1,INSD:BE530623.1,INSD:DR348892.1,
INSD:EH918449.1,INSD:AV526578.1,INSD:BP630311.1,
INSD:AV540763.1,INSD:ES211625.1,INSD:EL979267.1,
INSD:EL196048.1,INSD:DR348918.1,INSD:EL330643.1,
INSD:EL210827.1,INSD:EL257269.1,INSD:AV518205.1,
INSD:DR348910.1,INSD:EH975983.1,INSD:BP820608.1,
INSD:DR348884.1,INSD:DR348902.1,INSD:DR348896.1,
INSD:AV791366.1,INSD:BP629386.1,INSD:AV813785.1,
INSD:DR348887.1,INSD:DR348905.1,INSD:BP585011.1,
INSD:DR348876.1,INSD:DR348879.1,INSD:AV547774.1,
INSD:EL030904.1,INSD:AV811023.1,INSD:BP598310.1,
INSD:DR348931.1,INSD:BP794562.1,INSD:AV525123.1,
INSD:CK119935.1,INSD:ES076970.1,INSD:EH929025.1,
INSD:ES113822.1,INSD:R84170.1,INSD:DR263441.1,
INSD:DR348917.1,INSD:DR348913.1,INSD:AV810867.1,
INSD:ES200586.1,INSD:EH922854.1,INSD:AV793814.1,
INSD:EL220977.1,INSD:AV830082.1,INSD:DR348889.1,
INSD:AV561061.1,INSD:AV530478.1,INSD:EL201210.1,
INSD:BP656675.1,INSD:AI100533.1,INSD:DR348894.1,
INSD:BP594292.1,INSD:DR348920.1,INSD:DR348919.1,
INSD:EL995931.1,INSD:BP793714.1,INSD:AV524879.1,
INSD:DR348880.1,INSD:BP645491.1,INSD:DR348895.1,
INSD:DR348907.1,INSD:CK120060.1,INSD:AV560441.1,
INSD:DR348882.1,INSD:EL147016.1,INSD:BP594608.1,
INSD:EL156911.1,INSD:BP609390.1,INSD:AV532087.1,
INSD:AV805900.1,INSD:EH887673.1,INSD:BP855404.2,
INSD:ES052896.1,INSD:DR348934.1,INSD:AV536238.1,
INSD:DR348906.1,INSD:BP627312.1,INSD:BP600301.1,
INSD:EH944564.1,INSD:AV815301.1,INSD:EG520480.1,
INSD:AV795252.1,INSD:DR348936.1,INSD:EH861902.1,
INSD:DR374997.1,INSD:CB258615.1,INSD:AV823793.1,
INSD:AV523970.1,INSD:DR348903.1,INSD:EL070456.1,
INSD:AU227879.1,INSD:EH840674.1,INSD:AV527600.1,
INSD:EH926465.1,INSD:EL066208.1,INSD:DR348874.1,
INSD:EL034356.1,INSD:DR348886.1,INSD:DR348935.1,
INSD:BP792803.1,INSD:BP785228.1,INSD:CB257913.1,
INSD:DR348877.1,INSD:BE524787.1,INSD:EH830235.1,
INSD:DR348930.1,INSD:ES209692.1,INSD:DR338787.1,
INSD:EL241120.1,INSD:EL201981.1,INSD:EL058881.1,
INSD:DR348908.1,INSD:ES048981.1,INSD:EH958788.1,
INSD:BP616255.1,INSD:DR348904.1,INSD:BE527746.1,
INSD:BP827991.1,INSD:EH874611.1,INSD:AV547865.1,
INSD:BP610060.1,INSD:EL245883.1,INSD:CF772981.1,
INSD:DR348914.1,INSD:EH839514.1,INSD:EL030209.1,
INSD:AV441966.1,INSD:BP844405.1,INSD:DR348883.1,
INSD:AV786152.1,INSD:DR348921.1,INSD:EL043001.1,
INSD:EL309780.1,INSD:EL117994.1,INSD:DR348899.1,
INSD:CB257731.1,INSD:EH896576.1,INSD:EL175718.1,
INSD:EL044492.1,INSD:AV527808.1,INSD:ES045700.1,
INSD:AV802166.1,INSD:EH940453.1,INSD:EL087708.1,
INSD:AV788865.1,INSD:BU636285.1,INSD:BX837452.1,
INSD:BP605423.1,INSD:ES200848.1,INSD:AV525416.1,
INSD:CB263929.1,INSD:AV524486.1,INSD:ES140489.1,
INSD:DR348881.1,INSD:BP785954.1,INSD:EH927358.1,
INSD:AV533604.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX823842.1"
/note="Ribosomal protein L1p/L10e family; FUNCTIONS IN:
structural constituent of ribosome, RNA binding; INVOLVED
IN: translation, RNA processing; LOCATED IN: chloroplast
thylakoid membrane, ribosome, chloroplast, membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal
protein L1 (InterPro:IPR002143), Ribosomal protein L1,
3-layer alpha/beta-sandwich (InterPro:IPR016095),
Ribosomal protein L1, bacterial-type (InterPro:IPR005878);
BEST Arabidopsis thaliana protein match is: Ribosomal
protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G63490"
/db_xref="Araport:AT3G63490"
intron_pos 111:0 (1/5)
intron_pos 171:0 (2/5)
intron_pos 189:1 (3/5)
intron_pos 232:0 (4/5)
intron_pos 260:0 (5/5)
BEGIN
1 MAACATHSSL MLAYAAASTR SQDLTPTPSL FSFASSRPNH LSFPLLLLGG SRDRRCAAID
61 RASNHKFIVS AVAAEADLDT EEDLEQTATA VLDPPKPKKG KAALVLKRDR TRSKRFLEIQ
121 KLRETKKEYD VNTAISLLKQ TANTRFVESV EAHFRLNIDP KYNDQQLRAT VSLPKGTGQT
181 VIVAVLAQGE KVDEAKSAGA DIVGSDDLIE QIKGGFMEFD KLIASPDMMV KVAGLGKILG
241 PRGLMPNPKA GTVTANIPQS SRRGKLNSEQ TKLGLFTFHL GKLILQRKTF S
//