LOCUS AEE80488.1 1094 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transducin family protein / WD-40
repeat family protein protein.
ACCESSION CP002686-9459
PROTEIN_ID AEE80488.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G63460"
/gene_synonym="SEC31B"
/note="transducin family protein / WD-40 repeat family
protein; FUNCTIONS IN: molecular_function unknown; LOCATED
IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat, conserved site
(InterPro:IPR019775), WD40 repeat (InterPro:IPR001680),
WD40 repeat-like-containing domain (InterPro:IPR011046),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT1G18830.1)."
/db_xref="TAIR:AT3G63460"
/db_xref="Araport:AT3G63460"
intron_pos 106:2 (1/21)
intron_pos 125:0 (2/21)
intron_pos 166:0 (3/21)
intron_pos 198:1 (4/21)
intron_pos 210:2 (5/21)
intron_pos 246:0 (6/21)
intron_pos 265:1 (7/21)
intron_pos 298:0 (8/21)
intron_pos 338:0 (9/21)
intron_pos 352:1 (10/21)
intron_pos 393:0 (11/21)
intron_pos 425:2 (12/21)
intron_pos 613:0 (13/21)
intron_pos 644:0 (14/21)
intron_pos 706:0 (15/21)
intron_pos 777:1 (16/21)
intron_pos 797:0 (17/21)
intron_pos 849:0 (18/21)
intron_pos 893:0 (19/21)
intron_pos 985:1 (20/21)
intron_pos 1065:0 (21/21)
BEGIN
1 MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE
61 IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN PLSLIGSQPS ENALVGHLSV
121 HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW
181 NRKVQQILAS TSYNGTTVIW DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS
241 SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
301 ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY
361 KRPVGASFGF GGKLVSCHAR APAKGTSSIL SESLVSRTSE FEAAIENGDM TSLRGLCEKK
421 SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE
481 DTAADALDLD DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ
541 EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG GTALWESTRE
601 KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK
661 LMAAGNTLAA VLCYICAGNV DRTVEIWSRS LANERDGRSY AELLQDLMEK TLVLALATGN
721 KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT
781 TASGNTQPQS TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP
841 HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS FTGPSNNAYP
901 VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA
961 AAQAAPAPAT PPPTVQTADT SNVPAHQKPV IATLTRLFNE TSEALGGARA NTTKKREIED
1021 NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA
1081 TLKRMMVKAR QNVR
//