LOCUS AEE80475.1 570 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein protein.
ACCESSION CP002686-9441
PROTEIN_ID AEE80475.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G63400"
/inference="Similar to RNA sequence,
EST:INSD:EH913131.1,INSD:EH926346.1,INSD:ES136267.1,
INSD:BP631093.1,INSD:ES037169.1,INSD:BP628618.1,
INSD:EL103129.1,INSD:AV824464.1,INSD:AV521291.1,
INSD:BP658976.1,INSD:BP645361.1,INSD:AV787435.1,
INSD:BP650194.1,INSD:AV820747.1,INSD:AV560883.1,
INSD:EH948929.1,INSD:EL094022.1,INSD:BP633945.1,
INSD:BP594655.1,INSD:AV793556.1,INSD:EL146116.1,
INSD:AV519837.1,INSD:BP637789.1,INSD:AV786244.1,
INSD:EL340140.1,INSD:BP593055.1,INSD:EH983579.1,
INSD:EH932208.1,INSD:BP590709.1,INSD:EH847186.1,
INSD:BP643277.1,INSD:AV533076.1,INSD:BP628460.1,
INSD:BP647248.1,INSD:AV797742.1,INSD:AA597808.1,
INSD:BP630824.1,INSD:ES158700.1,INSD:DR368809.1,
INSD:BP633525.1,INSD:AV783957.1,INSD:EL040387.1,
INSD:BP589789.1,INSD:BP640468.1,INSD:BP652224.1,
INSD:AV781661.1,INSD:EL234082.1,INSD:BP670794.1,
INSD:AV783107.1,INSD:AV795442.1,INSD:EH929444.1,
INSD:BP669461.1,INSD:EL004660.1,INSD:BP795307.1,
INSD:AV439545.1,INSD:AV537538.1,INSD:ES151116.1,
INSD:EH870966.1,INSD:BP624267.1,INSD:AV543601.1,
INSD:AV559086.1,INSD:EG476190.1,INSD:BP659407.1,
INSD:AV813744.1,INSD:AV562627.1,INSD:BP643426.1,
INSD:BP569626.1,INSD:EH818271.1,INSD:ES151305.1,
INSD:AV819875.1,INSD:BP782229.1,INSD:EH889935.1,
INSD:BP652716.1,INSD:BP660335.1,INSD:BP644051.1,
INSD:AV786392.1,INSD:BP652623.1,INSD:BP593645.1,
INSD:AV788869.1,INSD:AV820698.1,INSD:Z30757.1,
INSD:BP589258.1,INSD:AV809091.1,INSD:BP835161.2,
INSD:EL085736.1,INSD:BP568068.1,INSD:EG496848.1,
INSD:BP810221.1,INSD:AV531036.1,INSD:AV549481.1,
INSD:AV518483.1,INSD:AV810854.1,INSD:BP783939.1,
INSD:BP627339.1,INSD:EH969779.1,INSD:EL279645.1,
INSD:BP584492.1,INSD:BP609068.1,INSD:AV822364.1,
INSD:EL216201.1,INSD:BP652228.1,INSD:AV522309.1,
INSD:EL234079.1,INSD:EL192402.1,INSD:ES166669.1,
INSD:AV818571.1,INSD:EH942946.1,INSD:BP570862.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000915.1,INSD:AY063975.1,INSD:AY568527.1,
INSD:AY133671.1,INSD:AF385702.1"
/note="Cyclophilin-like peptidyl-prolyl cis-trans
isomerase family protein; FUNCTIONS IN: peptidyl-prolyl
cis-trans isomerase activity; INVOLVED IN: protein
folding, RNA splicing; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl
cis-trans isomerase, cyclophilin-type
(InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase,
cyclophilin-type, conserved site (InterPro:IPR020892);
BEST Arabidopsis thaliana protein match is:
Cyclophilin-like peptidyl-prolyl cis-trans isomerase
family protein (TAIR:AT2G21130.1); Has 55912 Blast hits to
37431 proteins in 3034 species: Archae - 126; Bacteria -
11048; Metazoa - 23197; Fungi - 5408; Plants - 3603;
Viruses - 370; Other Eukaryotes - 12160 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G63400"
/db_xref="Araport:AT3G63400"
intron_pos 27:0 (1/10)
intron_pos 45:1 (2/10)
intron_pos 75:0 (3/10)
intron_pos 83:1 (4/10)
intron_pos 96:1 (5/10)
intron_pos 135:2 (6/10)
intron_pos 189:1 (7/10)
intron_pos 341:2 (8/10)
intron_pos 455:2 (9/10)
intron_pos 482:2 (10/10)
BEGIN
1 MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK
61 GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR LDHDGAGVLS MANCGPNTNG
121 SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA
181 HDAAEREKGK SKKSNKNFSP GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD
241 SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301 SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR
361 SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS FRSPSPSGVP KRIRKGRGFT
421 ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP
481 PRYNRRRRST SRSPDGYRRR LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI
541 RGGRTSPAES LSPSHSPSPP GKRGLVSYAD
//