LOCUS AEE80445.1 970 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TIC-like protein protein.
ACCESSION CP002686-9391
PROTEIN_ID AEE80445.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="TKL"
/locus_tag="AT3G63180"
/gene_synonym="ATTKL"
/gene_synonym="TIC-like"
/gene_synonym="TICKLE"
/inference="Similar to RNA sequence,
EST:INSD:BP562994.2,INSD:AV529941.1,INSD:AV522691.1,
INSD:EL249351.1,INSD:AV539878.1,INSD:CB260349.1,
INSD:BE520177.1,INSD:AV784975.1,INSD:EH845890.1,
INSD:BP637134.1,INSD:ES022612.1,INSD:AV528530.1,
INSD:AV548176.1,INSD:BE520178.1,INSD:EL030936.1,
INSD:EH963918.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX822572.1"
/note="TIC-like (TKL); EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: time for coffee
(TAIR:AT3G22380.1); Has 1941 Blast hits to 1280 proteins
in 240 species: Archae - 0; Bacteria - 154; Metazoa - 659;
Fungi - 350; Plants - 117; Viruses - 3; Other Eukaryotes -
658 (source: NCBI BLink)."
/db_xref="TAIR:AT3G63180"
/db_xref="Araport:AT3G63180"
intron_pos 29:1 (1/10)
intron_pos 125:1 (2/10)
intron_pos 159:0 (3/10)
intron_pos 265:2 (4/10)
intron_pos 291:0 (5/10)
intron_pos 314:0 (6/10)
intron_pos 379:1 (7/10)
intron_pos 402:2 (8/10)
intron_pos 425:0 (9/10)
intron_pos 529:0 (10/10)
BEGIN
1 MDKPREARRS TTNMAASNGV TKRRQRISEN SREQMHQEVA TVRDRPGKKE RDPESFNRSK
61 RRRSERFAPR NERDVEEDSS DESQGDDDYH QRKSFSSGRI PRHAASLMVA DEMIGVPVPR
121 KARSACLKRS HDCRTSSGSH SCEVVSPSSS TLSVKERKIV NGSKSRIPKP PKSSGTVEDD
181 LEIEIAEVLS GLKKQPHSSK RGDDSENSQK SSEVKGIKQL PAGVEICGLF TCKARFDSAN
241 IDKSTNGAKT SLVVASDIVD EKEPRVSEGP QLENNKDESH CISKLDIHLM VPPTLPSSSG
301 RVSLLPLVSD YCKRDSALKS KEKITVKNEM NPEEVKQKKV DKRYWLNLDI EGPNQETDRD
361 SNLRLQNLDW SQPQQAKSAP HSSVLPLPVA VASWPSGVPP QGHVALIQTG KPVDESNGSS
421 KLVQPRPKRC ATHFFIARNI QLHQHFLKTN HLPTPNKGSV YLKGGDLRPT AGNPSLHGSS
481 PILSLNSQPH VRNGDNISAP NVKASESGHF ASTRQNKPQP PPASISVVPA PAFIYPANHH
541 LQPVMVPSKS SRPTKSPHLA VGLASANFSH PSSSASEVSS PYLTVIPNNA YSFQLSSTIR
601 GGTPSQAVPF YNGSFYSPQM FQQPPQPLQR QSQAQRESKA SSCSSSSHRQ PQVSVNSLSS
661 QANVQQHRQM SQKFEVAGVN TDSRGSHTQK GGPFGQIMAA PVQPQNFSMS FASIASSAPP
721 ATLNFSSNGY HISTPPGVAH QKNHQSSEAK TGGGSCSSNA EDPKKNLQGK PQGMMNGHTL
781 VFDNPSRTLN FVSGTWPPPA ATAINGDPSV FTQHLTQRQQ QSGRSKMMMT HSQADSVSAT
841 SSQWKNPATS SSLTSCTSLN LKQFQSQQQI RTHGQTQISF AAPTNPQPSQ GKQGRSGGSS
901 PSVTGSASHG KPANSKVSNS KALLLSPVPL SQEHTENPAS GSTQKNSPVC GRTVPPIITS
961 CPGHLSELKY
//