LOCUS AEE80434.1 404 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin carboxyl-terminal hydrolase
family protein protein.
ACCESSION CP002686-9379
PROTEIN_ID AEE80434.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G63090"
/inference="Similar to RNA sequence,
EST:INSD:BP639344.1,INSD:Z25657.1,INSD:AV441297.1,
INSD:BP838314.1,INSD:DR216653.1,INSD:Z33807.1,
INSD:BP832882.1,INSD:AV527498.1,INSD:DR370962.1,
INSD:EL998973.1,INSD:AV817830.1,INSD:DR216654.1,
INSD:AV831793.1,INSD:ES154413.1,INSD:BP852442.1,
INSD:EL197843.1,INSD:DR216655.1,INSD:ES007116.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY099872.1,INSD:BX824859.1,INSD:BT000315.1,
INSD:AY088371.1"
/note="Ubiquitin carboxyl-terminal hydrolase family
protein; CONTAINS InterPro DOMAIN/s: RNA recognition
domain, plant (InterPro:IPR021099); BEST Arabidopsis
thaliana protein match is: Ubiquitin carboxyl-terminal
hydrolase family protein (TAIR:AT2G31290.2); Has 411 Blast
hits to 407 proteins in 16 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G63090"
/db_xref="Araport:AT3G63090"
BEGIN
1 MVLRNLTISY EIIKSLKHAK EHSLGIQIRW ISSLKVVWKK DTRLDEAIEQ DKRYKLCARV
61 VKEVLNEPGQ VIPLRYLEKR RERLRLTFKA KSFVEMNPSL FEIYYDRIKP KSDPVQFLRP
121 TPRLRAFLDE EQRIYSENEP LLVSKLCQLL MMAKDKVISA DKLVHVKRDF GFPNDFLMKL
181 VQKYPNYFRL TGLPEEGKSF LELVSWNPDF AKSKIELRAE DETLKTGVRI RPNYNVKLPS
241 GFFLRKEMRE WTRDWLEQDY ISPYEDVSHL DQASKEMEKR TVGVVHELLS LSLLKRVPVP
301 TLGKFCDEFR FSNAFSSVFT RHSGIFYLSL KGGIKTAVLR EAYKDDELVD RDPLLAIKDK
361 FLRLLEEGWQ ERKDRLKLQR EQVQKDREMM LAAKSNEPIE RLCD
//