LOCUS AEE80422.1 413 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NPL4-like protein 1 protein.
ACCESSION CP002686-9367
PROTEIN_ID AEE80422.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="NPL41"
/locus_tag="AT3G63000"
/gene_synonym="NPL4-like protein 1"
/inference="Similar to RNA sequence,
EST:INSD:EL263775.1,INSD:BP564306.1,INSD:AV793848.1,
INSD:BP832420.2,INSD:EL001850.1,INSD:AV519740.1,
INSD:CB257298.1,INSD:EL116039.1,INSD:BP635538.1,
INSD:DR243057.1,INSD:EL968109.1,INSD:DR377019.1,
INSD:BE522325.1,INSD:BP636702.1,INSD:ES057236.1,
INSD:BE526394.1,INSD:DR243048.1,INSD:BP802148.1,
INSD:BP821307.1,INSD:EG495560.1,INSD:DR243063.1,
INSD:EH949731.1,INSD:BP837741.1,INSD:DR243060.1,
INSD:BE522326.1,INSD:EL044242.1,INSD:CB257301.1,
INSD:AA394986.1,INSD:CA781452.1,INSD:BP569308.1,
INSD:ES204209.1,INSD:AV799554.1,INSD:EL967641.1,
INSD:ES018566.1,INSD:AV538861.1,INSD:EL183480.1,
INSD:AV551025.1,INSD:AV527740.1,INSD:DR243053.1,
INSD:ES101401.1,INSD:AV798940.1,INSD:EH888776.1,
INSD:BP824758.2,INSD:U36595.1,INSD:AV523775.1,
INSD:DR243062.1,INSD:BX834983.1,INSD:BP654093.1,
INSD:ES080052.1,INSD:ES154358.1,INSD:ES111307.1,
INSD:DR243065.1,INSD:BP637331.1,INSD:EH848498.1,
INSD:DR243054.1,INSD:DR243061.1,INSD:AV518808.1,
INSD:ES009746.1,INSD:EL146513.1,INSD:EL011201.1,
INSD:BX837949.1,INSD:DR243059.1,INSD:EL074782.1,
INSD:DR372088.1,INSD:EL987093.1,INSD:ES105207.1,
INSD:EH799925.1,INSD:AA650893.1,INSD:ES111361.1,
INSD:DR243064.1,INSD:DR243056.1,INSD:BP589302.1,
INSD:DR243050.1,INSD:AV533415.1,INSD:AI993478.1,
INSD:EH873292.1,INSD:DR243058.1,INSD:BP591163.1,
INSD:ES039816.1,INSD:BP837731.2,INSD:EH807080.1,
INSD:BP657732.1,INSD:AV827672.1,INSD:BX834792.1,
INSD:DR243055.1,INSD:AV551197.1,INSD:DR243051.1,
INSD:BX835045.1,INSD:DR243052.1,INSD:EL160628.1,
INSD:R30256.1,INSD:DR243049.1,INSD:ES027069.1,
INSD:ES120350.1,INSD:ES025056.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824458.1,INSD:BX823901.1,INSD:BX823936.1,
INSD:BX824374.1,INSD:AY056362.1,INSD:BX823691.1,
INSD:AY035064.1,INSD:BX822373.1,INSD:BX823000.1,
INSD:BX823499.1,INSD:BX824545.1,INSD:BX824998.1,
INSD:BX824332.1,INSD:BX823954.1,INSD:BX822737.1"
/note="NPL4-like protein 1 (NPL41); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NPL4
(InterPro:IPR007717); BEST Arabidopsis thaliana protein
match is: Nuclear pore localisation protein NPL4
(TAIR:AT2G47970.1); Has 398 Blast hits to 398 proteins in
186 species: Archae - 0; Bacteria - 0; Metazoa - 128;
Fungi - 123; Plants - 67; Viruses - 0; Other Eukaryotes -
80 (source: NCBI BLink)."
/db_xref="TAIR:AT3G63000"
/db_xref="Araport:AT3G63000"
intron_pos 330:0 (1/1)
BEGIN
1 MTMLRVRSRD GLERVSVDGP HITVSQLKTL IQDQLQIPIH NQTLSTNRNL LLAKSPSDFL
61 AFTDMADPNL RISSLNLAHG SMVYLAYEGE RTIRGGPAVT PAGSFGRKMT VEDLIARQMR
121 VGRQEKAHCD SVSFDRDCAN AFQHFVNESL AFAVKRGGFM YGNVSEDGQV EVNFIYEPPQ
181 QGMEDNLILM RDSEEEKRVD AIALGLGMRR VGFIFNQTVT QDKKEYTLSN VEVLLAAQLH
241 AESELKEWVT AVVKLEINED GGADVHFEPF QMSDMCVRLF KEGWFETEIG PEDDPKLSKL
301 KKEVVVGVKD VKEVDNDFFL VLVKILDHQG PLSCTFPIEN RNTQTTMRAL KTHMERARSL
361 PFVKRISDFH LLLFVAQFLD VSSDVPALAE CVRLQSHVPE GYELLIDSMA NTS
//