LOCUS AEE80410.1 422 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Peptide chain release factor 1 protein.
ACCESSION CP002686-9352
PROTEIN_ID AEE80410.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="APG3"
/locus_tag="AT3G62910"
/gene_synonym="ALBINO AND PALE GREEN"
/gene_synonym="Arabidopsis thaliana chloroplast RF1"
/gene_synonym="AtcpRF1"
/gene_synonym="chloroplast ribosome release factor 1"
/gene_synonym="cpRF1"
/inference="Similar to RNA sequence,
EST:INSD:EL216543.1,INSD:AV558327.1,INSD:BP785532.1,
INSD:EH880484.1,INSD:T41756.1,INSD:EL254686.1,
INSD:EL141374.1,INSD:DR368467.1,INSD:BP786052.1,
INSD:AV558301.1,INSD:EH937403.1,INSD:ES090436.1,
INSD:AV783963.1,INSD:CB074519.1,INSD:DR367843.1,
INSD:EL182913.1,INSD:ES061175.1,INSD:BP560941.2"
/inference="Similar to RNA sequence,
mRNA:INSD:AY125535.1,INSD:BX822806.1,INSD:AB109893.1,
INSD:AY090253.1"
/note="ALBINO AND PALE GREEN (APG3); FUNCTIONS IN:
translation release factor activity, codon specific,
translation release factor activity; INVOLVED IN:
translational termination, chloroplast organization;
LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Peptide chain release factor 1
(InterPro:IPR004373), Class I peptide chain release factor
(InterPro:IPR000352), Peptide chain release factor
(InterPro:IPR005139); BEST Arabidopsis thaliana protein
match is: Peptide chain release factor 1
(TAIR:AT2G47020.1); Has 17224 Blast hits to 17222 proteins
in 2820 species: Archae - 0; Bacteria - 10525; Metazoa -
262; Fungi - 197; Plants - 224; Viruses - 13; Other
Eukaryotes - 6003 (source: NCBI BLink)."
/db_xref="TAIR:AT3G62910"
/db_xref="Araport:AT3G62910"
intron_pos 54:0 (1/14)
intron_pos 73:0 (2/14)
intron_pos 100:0 (3/14)
intron_pos 119:1 (4/14)
intron_pos 154:0 (5/14)
intron_pos 171:1 (6/14)
intron_pos 188:0 (7/14)
intron_pos 210:0 (8/14)
intron_pos 265:0 (9/14)
intron_pos 289:1 (10/14)
intron_pos 333:2 (11/14)
intron_pos 353:0 (12/14)
intron_pos 369:0 (13/14)
intron_pos 397:0 (14/14)
BEGIN
1 MNSSMTTSPT ARAFLHLHSS PFTLRSRKSP SGVCLVSWPP SRSRRTRRLV CMAEPYLIRK
61 MESVEKTWKE LSVKLADPDV VSNQSEYQKL AQSMSELDEV VTVFRRFKDC EKQLLESKVL
121 AKEAGDDEDM AEMIGSEINS LTKEIEELEK QLKVLLLPSD PLDARNILLE VRAGTGGDEA
181 AIWTGDLVRM YQRYSERSSW KFSMVSCSEA EHGGYKTCVM EIKGNRVYSK LKYESGVHRV
241 QRVPQTETQG RVHTSTATVA IMPEADEVEV VIDPKDIELT SARSGGAGGQ NVNKVETAID
301 LFHKPSGIRI FCTEERTQIR NKARAFQLLR AKLYEIKVRE QQEKIRNERK SQVGTGARSE
361 KIRTYNYKDS RVTDHRLKMN FALTTFLDGA LEDAVQACAA LEQKELMEEL SESVAASSAT
421 SG
//