LOCUS AEE80408.2 1403 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana CW-type Zinc Finger protein.
ACCESSION CP002686-9351
PROTEIN_ID AEE80408.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G62900"
/inference="Similar to RNA sequence,
EST:INSD:EL098007.1,INSD:EL254492.1,INSD:EL078706.1,
INSD:EL223055.1,INSD:ES056222.1,INSD:BP782857.1,
INSD:EL285882.1,INSD:ES159554.1,INSD:EL164494.1,
INSD:ES060681.1,INSD:EL238909.1,INSD:EL184118.1,
INSD:EH841353.1,INSD:EG473690.1,INSD:EL013376.1,
INSD:ES159116.1,INSD:ES018615.1"
/note="CW-type Zinc Finger; FUNCTIONS IN: zinc ion
binding; INVOLVED IN: biological_process unknown; LOCATED
IN: cellular_component unknown; EXPRESSED IN: trichome;
CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type
(InterPro:IPR011124); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G02990.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G62900"
/db_xref="Araport:AT3G62900"
intron_pos 34:0 (1/9)
intron_pos 58:1 (2/9)
intron_pos 102:0 (3/9)
intron_pos 221:0 (4/9)
intron_pos 604:2 (5/9)
intron_pos 1177:0 (6/9)
intron_pos 1231:2 (7/9)
intron_pos 1285:1 (8/9)
intron_pos 1339:0 (9/9)
BEGIN
1 MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK
61 YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG ESQSGNAASS SVPKKAKSGL
121 ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG
181 LGLDVSPSLS LDNNSLSGSE GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL
241 IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
301 NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD
361 RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA SGYPRKVGKY KGSKASDSVK
421 KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV
481 VAVKPQSDSK KAEDTYKDFF GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE
541 PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
601 LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG
661 FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA EDERQIHKQK EKGKAVDHLS
721 DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP
781 RVSSKMPKEE GGASDTGNSN STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS
841 YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
901 PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE
961 SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD HILGEGKQSS DHHRRSNDSL
1021 AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI
1081 PERSNIADLA SPSRPPSRGV QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK
1141 SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201 LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV
1261 VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH PAAVDRVGTS RGISSPLVAG
1321 NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL
1381 DYNFQDMEGL LRLVKLAMKA NNR
//