LOCUS AEE80346.1 475 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRICHOME BIREFRINGENCE-LIKE 6 protein.
ACCESSION CP002686-9265
PROTEIN_ID AEE80346.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="TBL6"
/locus_tag="AT3G62390"
/gene_synonym="TRICHOME BIREFRINGENCE-LIKE 6"
/inference="Similar to RNA sequence,
EST:INSD:EL195600.1,INSD:AU237537.1,INSD:AV551210.1,
INSD:AU228611.1,INSD:EL320161.1,INSD:DR279142.1,
INSD:EH992196.1,INSD:EH886997.1,INSD:CB255888.1,
INSD:DR279140.1,INSD:EL036162.1,INSD:DR279143.1,
INSD:EG427297.1,INSD:EL036083.1,INSD:DR279141.1,
INSD:DR279139.1,INSD:DR380616.1,INSD:BP603362.1,
INSD:EL293025.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK229044.1,INSD:AY085065.1"
/note="TRICHOME BIREFRINGENCE-LIKE 6 (TBL6); CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF231,
plant (InterPro:IPR004253); BEST Arabidopsis thaliana
protein match is: Plant protein of unknown function
(DUF828) (TAIR:AT3G12060.1); Has 1344 Blast hits to 1327
proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1344; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G62390"
/db_xref="Araport:AT3G62390"
intron_pos 192:2 (1/4)
intron_pos 257:0 (2/4)
intron_pos 320:2 (3/4)
intron_pos 373:2 (4/4)
BEGIN
1 MERQRSFSVK STRVLAFIIT IISSAIVFFT FFSSSLLKSN SSLYPTPEAN FQIDLSPIAA
61 ISDSSVSPQA SPILISTHFN SPENTSGSSK ISVFEQKISG ESLVKEVREI ANLTSIKVIE
121 LPSNNGEDKK TEKRIEECDV TKGKWVYDSD YPLYTNASCP FIDEGFGCQS NGRLDLNYMN
181 WRWEPQDCHA PRFNATKMLE MIRGKRLVFV GDSINRNQWE SMLCLLFQAV KDPKRVYETH
241 NRRITKEKGN YSFRFVDYKC TVEFYVTHFL VREGRARIGK KRRETLRIDA MDRTSSRWKG
301 ANILVFNTAH WWSHYKTKSG VNYYQEGDLI HPKLDVSTAF KKALQTWSSW VDKNVDPKKT
361 RVFFRSAAPS HFSGGEWNSG GHCREANMPL NQTFKPSYSS KKSIVEDVLK QMRTPVTLLN
421 VSGLSQYRID AHPSIYGTKP ENRRSRAVQD CSHWCLPGVP DTWNHFLYLH LLHKR
//