LOCUS AEE80315.1 214 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NEFA-interacting nuclear protein protein.
ACCESSION CP002686-9222
PROTEIN_ID AEE80315.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G62140"
/inference="Similar to RNA sequence,
EST:INSD:ES128079.1,INSD:EG469623.1,INSD:EG469627.1,
INSD:EG469511.1,INSD:EG469653.1,INSD:EG469647.1,
INSD:EG469609.1,INSD:ES134683.1,INSD:ES127461.1,
INSD:EH936812.1,INSD:ES156286.1,INSD:EL161494.1,
INSD:EG496493.1,INSD:EG469605.1,INSD:EG469628.1,
INSD:EG469471.1,INSD:EG517562.1,INSD:ES074649.1,
INSD:EG469501.1,INSD:ES152425.1,INSD:EG469613.1,
INSD:EL233201.1,INSD:EG469615.1,INSD:ES124803.1,
INSD:DR363551.1,INSD:EH909637.1,INSD:EG469631.1,
INSD:EG496503.1,INSD:EH985323.1,INSD:EG497954.1,
INSD:DR363550.1,INSD:EH802350.1,INSD:EH875488.1,
INSD:ES172163.1,INSD:ES024938.1,INSD:EG469504.1,
INSD:ES053766.1,INSD:EL256193.1,INSD:EH892041.1,
INSD:EG469472.1,INSD:EG517564.1,INSD:DR363552.1,
INSD:DR363553.1,INSD:ES008411.1,INSD:EG469611.1,
INSD:EG469648.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY735628.1,INSD:AY924805.1"
/note="CONTAINS InterPro DOMAIN/s: NEFA-interacting
nuclear protein NIP30, N-terminal (InterPro:IPR019331);
Has 398 Blast hits to 395 proteins in 139 species: Archae
- 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink)."
/db_xref="TAIR:AT3G62140"
/db_xref="Araport:AT3G62140"
intron_pos 20:0 (1/6)
intron_pos 45:0 (2/6)
intron_pos 64:1 (3/6)
intron_pos 83:0 (4/6)
intron_pos 104:0 (5/6)
intron_pos 130:0 (6/6)
BEGIN
1 MVDETEKPIR LLNFVSEEQL DESKKERGER VEDGTFQRDR ALYEILKENK DKKDAEFNER
61 FKHRPPKALD EDETEFLDKL EMSKREYERQ LANEEDEQLR NFQAAVAARS AILHEPKEAA
121 LPPPAPVTKE QKPIGKRNPA TRPFKAIIKV KPQPKKAKAT EKEEKEIPGN GKPASHIDQA
181 SLDSVKGNVT GKTTEGLQTG LALVSYSDES EDDD
//