LOCUS AEE80313.1 530 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Class II aaRS and biotin synthetases
superfamily protein protein.
ACCESSION CP002686-9219
PROTEIN_ID AEE80313.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G62120"
/inference="Similar to RNA sequence,
EST:INSD:AV809143.1,INSD:AV782567.1,INSD:EL337487.1,
INSD:EL271919.1,INSD:AV535738.1,INSD:ES178010.1,
INSD:BP608906.1,INSD:EL247600.1,INSD:EL260599.1,
INSD:ES183498.1,INSD:EL318880.1,INSD:ES116786.1,
INSD:ES075051.1,INSD:AI999543.1,INSD:EH913946.1,
INSD:AA605481.1,INSD:BP610910.1,INSD:BP611394.1,
INSD:AV539222.1,INSD:BP604905.1,INSD:BP573973.1,
INSD:BP566499.1,INSD:DR355476.1,INSD:EL242720.1,
INSD:BP620274.1,INSD:ES103519.1,INSD:BP568467.1,
INSD:BP632131.1,INSD:EL065371.1,INSD:EL198483.1,
INSD:BP576395.1,INSD:BP639567.1,INSD:BP573944.1,
INSD:BP603849.1,INSD:EH950542.1,INSD:AV818733.1,
INSD:AV793589.1,INSD:BP793299.1,INSD:ES103487.1,
INSD:EL310348.1,INSD:AV807226.1,INSD:ES089605.1,
INSD:ES165892.1,INSD:BP788313.1,INSD:EH963992.1,
INSD:EL268066.1,INSD:BP570621.1,INSD:EH968811.1,
INSD:EL324386.1,INSD:BP777460.1,INSD:EL260572.1,
INSD:EL122186.1,INSD:BP564488.1,INSD:AV806954.1,
INSD:AV806373.1,INSD:AI100179.1,INSD:EL223952.1,
INSD:AV441853.1,INSD:EH823836.1,INSD:EH939661.1,
INSD:BP577314.1,INSD:AV547238.1,INSD:EL192241.1,
INSD:EG485838.1,INSD:BX839251.1,INSD:AV806722.1,
INSD:F14274.1,INSD:BX835518.1,INSD:DR259095.1,
INSD:BP790123.1,INSD:AV811995.1,INSD:AV547176.1,
INSD:EL062821.1,INSD:EL048200.1,INSD:CB264567.1,
INSD:ES114327.1,INSD:EL308590.1,INSD:EL192608.1,
INSD:BP794182.1,INSD:ES173224.1,INSD:BP568476.1,
INSD:DR363665.1,INSD:EL148678.1,INSD:BP602297.1,
INSD:BP566198.1,INSD:BP615418.1,INSD:BP577316.1,
INSD:BP783296.1,INSD:ES209452.1,INSD:BP566220.1,
INSD:F14282.1,INSD:BP647647.1,INSD:EL040445.1,
INSD:ES037981.1,INSD:ES044162.1,INSD:ES135811.1,
INSD:EH844887.1,INSD:BE529682.1,INSD:EH815886.1,
INSD:BP581493.1,INSD:AV807936.1,INSD:ES120994.1,
INSD:BP785752.1,INSD:EL991407.1,INSD:BP783874.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY128720.1"
/note="Class II aaRS and biotin synthetases superfamily
protein; FUNCTIONS IN: proline-tRNA ligase activity,
aminoacyl-tRNA ligase activity, nucleotide binding, ATP
binding; INVOLVED IN: prolyl-tRNA aminoacylation,
translation, tRNA aminoacylation for protein translation;
LOCATED IN: membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/
S), conserved domain (InterPro:IPR002314), Prolyl-tRNA
synthetase, class IIa, prokaryotic-type
(InterPro:IPR004499), Prolyl-tRNA synthetase, class II,
C-terminal (InterPro:IPR016061), Anticodon-binding
(InterPro:IPR004154), Prolyl-tRNA synthetase, class II
(InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa,
conserved region (InterPro:IPR002316), Aminoacyl-tRNA
synthetase, class II, conserved domain
(InterPro:IPR006195); BEST Arabidopsis thaliana protein
match is: Class II aaRS and biotin synthetases superfamily
protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990
proteins in 2633 species: Archae - 270; Bacteria - 6522;
Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0;
Other Eukaryotes - 1854 (source: NCBI BLink)."
/db_xref="TAIR:AT3G62120"
/db_xref="Araport:AT3G62120"
intron_pos 65:0 (1/10)
intron_pos 95:0 (2/10)
intron_pos 134:0 (3/10)
intron_pos 196:2 (4/10)
intron_pos 219:0 (5/10)
intron_pos 260:0 (6/10)
intron_pos 311:0 (7/10)
intron_pos 406:0 (8/10)
intron_pos 479:0 (9/10)
intron_pos 510:1 (10/10)
BEGIN
1 MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE
61 WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE IKKMKVKNCY FPLFVSPGVL
121 EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW
181 CNVVRWEFSN PTPFIRSREF LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK
241 GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301 QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA
361 LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD LENDQVRTVR RDNGVKEDIP
421 RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV
481 ERDVKARTKG ETGAAKTLCS PFDQPELPEG TLCFASGKPA KKWTYWGRSY
//