LOCUS AEE80235.1 74 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana arabinogalactan protein 20 protein.
ACCESSION CP002686-9122
PROTEIN_ID AEE80235.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="AGP20"
/locus_tag="AT3G61640"
/gene_synonym="arabinogalactan protein 20"
/gene_synonym="Arabinogalactan protein 20"
/gene_synonym="AtAGP20"
/inference="Similar to RNA sequence,
EST:INSD:DR211070.1,INSD:EL328493.1,INSD:DR211067.1,
INSD:CB255183.1,INSD:DR346177.1,INSD:AI996690.1,
INSD:ES024191.1,INSD:DR211073.1,INSD:DR211069.1,
INSD:CB255187.1,INSD:EH983733.1,INSD:AV536632.1,
INSD:EL155637.1,INSD:DR211072.1,INSD:EL289250.1,
INSD:DR211066.1,INSD:DR211071.1,INSD:AA598050.1,
INSD:EL337238.1,INSD:DR371794.1,INSD:CB253861.1,
INSD:DR211074.1,INSD:BP781550.1,INSD:EL309811.1,
INSD:DR346179.1,INSD:F14361.1,INSD:ES149372.1,
INSD:EG480049.1,INSD:DR211068.1,INSD:EG480050.1,
INSD:DR346176.1,INSD:ES113150.1,INSD:EL067186.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT025563.1,INSD:BX842186.1,INSD:AY084640.1,
INSD:BX825262.1,INSD:BX825976.1,INSD:BX826105.1"
/note="arabinogalactan protein 20 (AGP20); CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1070
(InterPro:IPR009424); BEST Arabidopsis thaliana protein
match is: arabinogalactan protein 16 (TAIR:AT2G46330.1);
Has 106 Blast hits to 106 proteins in 13 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 106;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G61640"
/db_xref="Araport:AT3G61640"
intron_pos 39:1 (1/1)
BEGIN
1 MASRNSVAVI ALFAFVFAVI SPFAGAQSLA PAPSPTSDGT SIDQGIAYLL MVVALVLTYL
61 IHPLDASSSS YTFF
//