LOCUS AEE80217.1 766 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002686-9099
PROTEIN_ID AEE80217.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G61520"
/inference="Similar to RNA sequence,
EST:INSD:EL999260.1,INSD:BP652906.1,INSD:EL999623.1,
INSD:EH925494.1,INSD:AV788092.1,INSD:ES058201.1,
INSD:DR380252.1,INSD:ES043489.1,INSD:EL975340.1,
INSD:ES005151.1,INSD:BP814466.1,INSD:EL999405.1,
INSD:EL087159.1,INSD:EH809892.1,INSD:EL108077.1,
INSD:EL033881.1,INSD:ES071077.1,INSD:AV530065.1,
INSD:ES096415.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY052227.1,INSD:AY084904.1,INSD:AK221912.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395
proteins in 309 species: Archae - 5; Bacteria - 71;
Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0;
Other Eukaryotes - 1868 (source: NCBI BLink)."
/db_xref="TAIR:AT3G61520"
/db_xref="Araport:AT3G61520"
BEGIN
1 MSIMLSISRR RNSYILLNHS RFLRRFSYDV DPRPEIKLES QEFVVVKFVK TLQKTPQHDW
61 ASSESLSALV VSSSSASPLV FSQITRRLGS YSLAISFFEY LDAKSQSLKR REESLSLALQ
121 SVIEFAGSEP DPRDKLLRLY EIAKEKNIPL TVVATNLLIR WFGRMGMVNQ SVLVYERLDS
181 NMKNSQVRNV VVDVLLRNGL VDDAFKVLDE MLQKESVFPP NRITADIVLH EVWKGRLLTE
241 EKIIALISRF SSHGVSPNSV WLTRFISSLC KNARANAAWD ILSDLMKNKT PLEAPPFNAL
301 LSCLGRNMDI SRMNDLVLKM DEVKIRPDVV TLGILINTLC KSRRVDEALE VFEKMRGKRT
361 DDGNVIKADS IHFNTLIDGL CKVGRLKEAE ELLVRMKLEE RCAPNAVTYN CLIDGYCRAG
421 KLETAKEVVS RMKEDEIKPN VVTVNTIVGG MCRHHGLNMA VVFFMDMEKE GVKGNVVTYM
481 TLIHACCSVS NVEKAMYWYE KMLEAGCSPD AKIYYALISG LCQVRRDHDA IRVVEKLKEG
541 GFSLDLLAYN MLIGLFCDKN NTEKVYEMLT DMEKEGKKPD SITYNTLISF FGKHKDFESV
601 ERMMEQMRED GLDPTVTTYG AVIDAYCSVG ELDEALKLFK DMGLHSKVNP NTVIYNILIN
661 AFSKLGNFGQ ALSLKEEMKM KMVRPNVETY NALFKCLNEK TQGETLLKLM DEMVEQSCEP
721 NQITMEILME RLSGSDELVK LRKFMQGYSV ASPTEKASPF DVFSLG
//