LOCUS AEE80199.1 349 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SKP1-like 21 protein.
ACCESSION CP002686-9072
PROTEIN_ID AEE80199.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SK21"
/locus_tag="AT3G61415"
/gene_synonym="ASK21"
/gene_synonym="SKP1-like 21"
/inference="Similar to RNA sequence,
EST:INSD:EH981523.1,INSD:EH852988.1,INSD:AI994751.1,
INSD:DR286403.1,INSD:N38071.1,INSD:DR286404.1,
INSD:EL137072.1,INSD:DR286399.1,INSD:DR286402.1,
INSD:DR286401.1,INSD:DR286398.1,INSD:BX839557.1,
INSD:DR286400.1,INSD:BX840252.1"
/note="SKP1-like 21 (SK21); FUNCTIONS IN:
ubiquitin-protein ligase activity; INVOLVED IN:
ubiquitin-dependent protein catabolic process; LOCATED IN:
SCF ubiquitin ligase complex; EXPRESSED IN: stem, fruit,
root, inflorescence, leaf; EXPRESSED DURING: seedling
growth; CONTAINS InterPro DOMAIN/s: SKP1 component,
dimerisation (InterPro:IPR016072), SKP1 component
(InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333),
SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis
thaliana protein match is: SKP1-like 20
(TAIR:AT2G45950.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT3G61415"
/db_xref="Araport:AT3G61415"
intron_pos 13:0 (1/8)
intron_pos 88:0 (2/8)
intron_pos 152:0 (3/8)
intron_pos 189:0 (4/8)
intron_pos 212:1 (5/8)
intron_pos 246:0 (6/8)
intron_pos 306:2 (7/8)
intron_pos 345:1 (8/8)
BEGIN
1 MSEGEMAIIK PEMMKSYIWL ETADGSIQQV EQEVAMFCPM ICQEVIQKGV GSSKNYAISL
61 PQRVNPAMLS LIFDYCRFHQ VPGRSNKERK VYDEKFIRMD TKRLCELTSA ADSLQLKPLV
121 DLTSRALARI IEGKTPEEIR EIFHLPDDLT EEEKLEPLKN TMDDPRIRLL NRLYAKKRKE
181 LKEREKLKSV EVEEHVDERS VDDLLSFING RDPKVVKTSK SKKKNKKRKE QKNGSSNGTC
241 EALEKDLHNL DSKSQSAEIV DNTASCLGDV SNLPSMEDDI FTPKTEFEDG YIDDEIDPAL
301 KELLDREVED FARRLNSSWV LSIGQERQPV NFSINGNGTS RRLTEIGHT
//