LOCUS AEE80177.1 498 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DEA(D/H)-box RNA helicase family
protein protein.
ACCESSION CP002686-9035
PROTEIN_ID AEE80177.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G61240"
/inference="Similar to RNA sequence,
EST:INSD:EL207296.1,INSD:AV822832.1,INSD:DR259357.1,
INSD:AA597766.1,INSD:BP590231.1,INSD:AV534078.1,
INSD:BU634891.1,INSD:EL074680.1,INSD:BP785984.1,
INSD:BP789345.1,INSD:ES193283.1,INSD:EL005251.1,
INSD:AV809125.1,INSD:EH820098.1,INSD:CB261521.1,
INSD:ES138731.1,INSD:ES047480.1,INSD:BP832414.1,
INSD:AI996836.1,INSD:ES035581.1,INSD:DR259358.1,
INSD:EH922624.1,INSD:ES125681.1,INSD:AV792942.1,
INSD:CB253948.1,INSD:EL036858.1,INSD:Z30728.1,
INSD:EL030504.1,INSD:AV562699.1,INSD:BP780275.1,
INSD:ES050443.1,INSD:DR384029.1,INSD:EL176814.1,
INSD:AA598143.1,INSD:N96877.1,INSD:ES206534.1,
INSD:ES157180.1,INSD:ES213585.1,INSD:AA598145.1,
INSD:EL063127.1,INSD:ES190884.1,INSD:BP662941.1,
INSD:ES058248.1,INSD:AV567544.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ010464.1,INSD:AY120712.1,INSD:BT000038.1"
/note="DEA(D/H)-box RNA helicase family protein; FUNCTIONS
IN: helicase activity, ATP-dependent helicase activity,
ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif
(InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box
type, N-terminal (InterPro:IPR011545), RNA helicase,
ATP-dependent, DEAD-box, conserved site
(InterPro:IPR000629), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: DEA(D/H)-box RNA helicase
family protein (TAIR:AT2G45810.1); Has 53038 Blast hits to
46572 proteins in 3157 species: Archae - 705; Bacteria -
22269; Metazoa - 8742; Fungi - 5746; Plants - 2904;
Viruses - 84; Other Eukaryotes - 12588 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G61240"
/db_xref="Araport:AT3G61240"
intron_pos 96:2 (1/8)
intron_pos 117:0 (2/8)
intron_pos 195:1 (3/8)
intron_pos 275:0 (4/8)
intron_pos 359:0 (5/8)
intron_pos 419:1 (6/8)
intron_pos 449:0 (7/8)
intron_pos 473:2 (8/8)
BEGIN
1 MNTNRGRYPP GVGTGRGAPP NPDYHQSYRQ QQPPQDQQYV QRGYSQNPQQ MQLQQQHQQQ
61 QQQQQWSRRP QLPGNASNAN EVVQQTTQPE ASSDANGQDW KATLRLPPPD TRYQTADVTA
121 TKGNEFEDYF LKRDLLKGIY EKGFEKPSPI QEESIPIALT GSDILARAKN GTGKTGAFCI
181 PVLEKIDPNN NVIQAMILVP TRELALQTSQ VCKELSKYLN IQVMVTTGGT SLRDDIMRLH
241 QPVHLLVGTP GRILDLTKKG VCVLKDCAML VMDEADKLLS AEFQPSLEEL IQFLPQNRQF
301 LMFSATFPVT VKAFKDRHLR KPYVINLMDQ LTLMGVTQYY AFVEERQKVH CLNTLFSKLQ
361 INQSIIFCNS VNRVELLAKK ITELGYSCFY IHAKMVQDHR NRVFHEFRNG ACRNLVCTDL
421 FTRGIDIQAV NVVINFDFPR TSESYLHRVG RSGRFGHLGL AVNLVTYEDR FKMYQTEQEL
481 GTEIKPIPSN IDQAIYCQ
//