LOCUS AEE80161.1 808 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homeodomain GLABROUS 1 protein.
ACCESSION CP002686-9014
PROTEIN_ID AEE80161.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HDG1"
/locus_tag="AT3G61150"
/gene_synonym="HD-GL2-1"
/gene_synonym="homeodomain GLABROUS 1"
/gene_synonym="HOMEODOMAIN-GLABRA2 1"
/inference="Similar to RNA sequence,
EST:INSD:DR366698.1,INSD:ES001687.1,INSD:ES131654.1,
INSD:BP785096.1,INSD:ES187158.1,INSD:ES063135.1,
INSD:EL250866.1,INSD:BP603533.1,INSD:EL116279.1,
INSD:EL339684.1,INSD:AV801470.1,INSD:DR366702.1,
INSD:DR366694.1,INSD:ES087849.1,INSD:EH980237.1,
INSD:BP609617.1,INSD:BP603568.1,INSD:DR383231.1,
INSD:EL987886.1,INSD:ES096103.1,INSD:Z46583.1,
INSD:EL234122.1,INSD:DR750933.1,INSD:BP588250.1,
INSD:DR366700.1,INSD:DR366696.1,INSD:EL117124.1,
INSD:DR366704.1,INSD:DR366699.1,INSD:DR750932.1,
INSD:AV825469.1,INSD:DR366695.1,INSD:ES096478.1,
INSD:BP666403.1,INSD:DR366703.1,INSD:F14249.1,
INSD:EL275504.1,INSD:DR366697.1,INSD:AV791353.1,
INSD:EL154593.1,INSD:ES041171.1,INSD:EH849053.1,
INSD:ES070081.1,INSD:ES125755.1,INSD:BP561881.2,
INSD:N96372.1,INSD:BP669292.1,INSD:BP667991.1,
INSD:AI994168.1,INSD:AI995900.1,INSD:EL042981.1,
INSD:DR366701.1,INSD:Z46584.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY096757.1,INSD:AY050866.1,INSD:BX825997.1"
/note="homeodomain GLABROUS 1 (HDG1); FUNCTIONS IN: DNA
binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, regulation of transcription; LOCATED IN:
nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Homeobox, conserved site (InterPro:IPR017970), Homeobox
(InterPro:IPR001356), Homeodomain-like
(InterPro:IPR009057), Lipid-binding START
(InterPro:IPR002913), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: Homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein
(TAIR:AT4G00730.1); Has 11756 Blast hits to 11371 proteins
in 530 species: Archae - 0; Bacteria - 4; Metazoa - 8768;
Fungi - 189; Plants - 2580; Viruses - 0; Other Eukaryotes
- 215 (source: NCBI BLink)."
/db_xref="TAIR:AT3G61150"
/db_xref="Araport:AT3G61150"
intron_pos 58:0 (1/8)
intron_pos 127:2 (2/8)
intron_pos 167:0 (3/8)
intron_pos 396:0 (4/8)
intron_pos 429:0 (5/8)
intron_pos 496:0 (6/8)
intron_pos 555:1 (7/8)
intron_pos 678:0 (8/8)
BEGIN
1 MNFNGFLDDG AGASKLLSDA PYNNHFSFSA VDTMLGSAAI APSQSLPFSS SGLSLGLQTN
61 GEMSRNGEIM ESNVSRKSSR GEDVESRSES DNAEAVSGDD LDTSDRPLKK KKRYHRHTPK
121 QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE
181 NDKLRAENMS VREAMRNPMC GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF
241 LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301 NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS
361 RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE MFPSMVSRTS TTEIISSGMG
421 GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL
481 PSGCLVQDMA NGYSKVTWIE HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT
541 ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601 IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH
661 IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV VVYAPVDIPA MQAVMNGGDS
721 AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL
781 TVESVETVNN LISCTVQKIK AALHCDST
//