LOCUS AEE80160.1 441 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana COP9 signalosome complex subunit 1 protein.
ACCESSION CP002686-9013
PROTEIN_ID AEE80160.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="FUS6"
/locus_tag="AT3G61140"
/gene_synonym="ARABIDOPSIS THALIANA FUSCA 6"
/gene_synonym="AtCSN1"
/gene_synonym="ATFUS6"
/gene_synonym="ATSK31"
/gene_synonym="CONSTITUTIVE PHOTOMORPHOGENIC 11"
/gene_synonym="COP11"
/gene_synonym="COP9 SIGNALOSOME SUBUNIT 1"
/gene_synonym="CSN1"
/gene_synonym="EMB78"
/gene_synonym="EMBRYO DEFECTIVE 78"
/gene_synonym="FUSCA 6"
/gene_synonym="SHAGGY-LIKE KINASE 31"
/gene_synonym="SK31"
/inference="Similar to RNA sequence,
EST:INSD:AV565145.1,INSD:ES025464.1,INSD:ES105443.1,
INSD:AV798542.1,INSD:BP849661.1,INSD:EL091609.1,
INSD:EL979545.1,INSD:AI992922.1,INSD:BP613685.1,
INSD:EL132666.1,INSD:EL264977.1,INSD:EH825865.1,
INSD:EL115649.1,INSD:ES077396.1,INSD:EL324754.1,
INSD:EH927489.1,INSD:EL166103.1,INSD:ES212412.1,
INSD:AV540187.1,INSD:AU229554.1,INSD:AV561728.1,
INSD:ES126528.1,INSD:BP782860.1,INSD:ES052410.1,
INSD:EH969052.1,INSD:DR353370.1,INSD:BU636266.1,
INSD:EG440685.1,INSD:EL207191.1,INSD:EH936044.1,
INSD:AU238374.1,INSD:EH844560.1,INSD:EH967907.1,
INSD:EL061447.1,INSD:EL115090.1,INSD:AV565202.1,
INSD:AA394935.1,INSD:EG440686.1,INSD:ES118002.1,
INSD:BP632984.1,INSD:AV559410.1,INSD:BP617465.1,
INSD:EL207014.1,INSD:DR281424.1,INSD:ES086095.1,
INSD:ES123877.1,INSD:AV560585.1,INSD:ES136874.1,
INSD:EH942513.1,INSD:BP582491.1,INSD:BP865148.1,
INSD:EL035581.1,INSD:EH897171.1,INSD:DR281423.1,
INSD:BU635915.1,INSD:ES127036.1,INSD:EL144559.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824208.1,INSD:BX824629.1,INSD:AF395057.1,
INSD:AF360295.1,INSD:AK117532.1"
/note="FUSCA 6 (FUS6); CONTAINS InterPro DOMAIN/s:
Proteasome component (PCI) domain (InterPro:IPR000717),
26S proteasome, regulatory subunit Rpn7
(InterPro:IPR019585); BEST Arabidopsis thaliana protein
match is: COP9 signalosome complex-related / CSN
complex-related (TAIR:AT3G12850.1); Has 1199 Blast hits to
1198 proteins in 240 species: Archae - 0; Bacteria - 0;
Metazoa - 515; Fungi - 231; Plants - 316; Viruses - 0;
Other Eukaryotes - 137 (source: NCBI BLink)."
/db_xref="TAIR:AT3G61140"
/db_xref="Araport:AT3G61140"
intron_pos 131:0 (1/5)
intron_pos 238:0 (2/5)
intron_pos 277:0 (3/5)
intron_pos 305:2 (4/5)
intron_pos 384:0 (5/5)
BEGIN
1 MERDEEASGP MMEMCTNGGE ETSNRRPIIS GEPLDIEAYA ALYKGRTKIM RLLFIANHCG
61 GNHALQFDAL RMAYDEIKKG ENTQLFREVV NKIGNRLGEK YGMDLAWCEA VDRRAEQKKV
121 KLENELSSYR TNLIKESIRM GYNDFGDFYY ACGMLGDAFK NYIRTRDYCT TTKHIIHMCM
181 NAILVSIEMG QFTHVTSYVN KAEQNPETLE PMVNAKLRCA SGLAHLELKK YKLAARKFLD
241 VNPELGNSYN EVIAPQDIAT YGGLCALASF DRSELKQKVI DNINFRNFLE LVPDVRELIN
301 DFYSSRYASC LEYLASLKSN LLLDIHLHDH VDTLYDQIRK KALIQYTLPF VSVDLSRMAD
361 AFKTSVSGLE KELEALITDN QIQARIDSHN KILYARHADQ RNATFQKVLQ MGNEFDRDVR
421 AMLLRANLLK HEYHARSARK L
//